Polyodon spathula (Mississippi paddlefish): 121305519
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Entry
121305519 CDS
T07273
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
pspa04144
Endocytosis
pspa04145
Phagosome
pspa04148
Efferocytosis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121305519 (si:dkey-13a21.4)
04145 Phagosome
121305519 (si:dkey-13a21.4)
04140 Autophagy - animal
121305519 (si:dkey-13a21.4)
04137 Mitophagy - animal
121305519 (si:dkey-13a21.4)
04148 Efferocytosis
121305519 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121305519 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121305519 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121305519 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
pspa04031
]
121305519 (si:dkey-13a21.4)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
121305519 (si:dkey-13a21.4)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121305519 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
121305519 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
121305519 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
121305519 (si:dkey-13a21.4)
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121305519 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
ATP_bind_1
Gtr1_RagA
AAA_16
Septin
G-alpha
AIG1
AAA_24
AAA
IIGP
RNA_helicase
VapE-like_dom
ABC_tran
AAA_5
AAA_7
nSTAND3
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121305519
NCBI-ProteinID:
XP_041093099
LinkDB
All DBs
Position
43:complement(2988327..2992095)
Genome browser
AA seq
206 aa
AA seq
DB search
MSPWEKVHLKVILLGHSGVGKSSFMNQFVNHRFTNLYRSTIGADFLTKEITADGKSVVLQ
IWDTAGTERFQSLGLALYRGAHCCLLLFDVTSSASFRALDLWKKEFLIQADPADPGHFPF
VVVGNKSDLPKREVSGRLAQDWCRENNAEYFEGSAKEAVNVDRAFQSAVRRSLQYHKDNS
PEPAFESFQLSSKIEPEEKPAKQCAC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccctgggagaaggttcacctcaaagttattttacttggacactctggggtgggg
aaatcgtccttcatgaaccagtttgtgaatcaccgcttcaccaacctgtaccgctccacc
atcggggcggacttcctcactaaggagatcaccgcggacgggaagagcgtcgttctccag
atctgggacacggccggtacagagcggttccagtccctggggctggcgctctaccgcggc
gctcactgctgtctgctgctcttcgacgtcacgtcctctgcttcgttccgggcgctggac
ctgtggaagaaagagtttctgatccaggccgacccagctgatcccggacacttcccgttc
gtagtggtcgggaataagagcgacttgcccaagcgagaggtctccggcagactggcccag
gactggtgccgggagaataacgcagaatatttcgaaggcagtgctaaggaggcggtgaac
gtcgacagagcgtttcagagcgcggtgcgacgctccctgcagtatcacaaggacaacagc
ccagaacctgcctttgagagtttccaactgtcctccaaaattgagccagaggagaaacct
gccaagcagtgcgcctgctga
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integrated database retrieval system
