Polyodon spathula (Mississippi paddlefish): 121305569
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Entry
121305569 CDS
T07273
Symbol
actl6b
Name
(RefSeq) actin-like protein 6B isoform X1
KO
K11652
actin-like protein 6B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121305569 (actl6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121305569 (actl6b)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121305569 (actl6b)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121305569 (actl6b)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121305569 (actl6b)
PBAF complex
121305569 (actl6b)
GBAF(ncBAF) complex
121305569 (actl6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
121305569
NCBI-ProteinID:
XP_041093170
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All DBs
Position
44:1910013..1923925
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AA seq
469 aa
AA seq
DB search
MHIDIDFLNPAKEIKATKMSGGVYGGDKKRQAPEHVSLGVALMGCSLGLVADEVGALVFD
IGSFSVRAGYAGEDCPKADFPTTVGVLVQDDVAMEMDGDKEKKIGKSYFIDTNSLHVPRE
SMETMSPLKNGMIQDWDCFQSILDHTYSKHMKSDPHLHPVLMSEAPWNTRAKRERLTELM
FEHYNIPAFFLCKTAVLTAFANGRATGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGD
FISMQCRELFQEMNIDIVPPYMIASKELVREGAPPSWKKKEKLPPVTKSWHNYMCNEVFQ
DFQASVLQVSDSPYDEQVAAQMPTLHFEMPSGFTSDYGAERLRIPEGLFDPSNVKGLSGN
TMLGAGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLTRELSQKTPPSMRLKL
IASNSSVERRFSPWIGGSILASLGTFQQMWISKQEYEEGGKQSVERKCP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgatatagattttttaaaccctgcaaaagaaattaaagcaacgaaaatgagt
ggcggagtgtatggcggagataagaaacggcaggccccagagcacgtgtcgttgggggtc
gcgctgatgggttgctctctgggtttggttgcagatgaagtgggcgcgctggtcttcgat
atcggctccttctccgtgcgggcgggctatgcaggtgaagactgccccaaggcggatttc
ccgaccacggtgggcgtgctggttcaggacgacgttgccatggaaatggacggagacaag
gagaaaaaaatcgggaagagctacttcatcgacaccaactccctgcacgtgccgagagag
agcatggagaccatgtctcctctcaagaacgggatgattcaagactgggattgcttccag
tccatcctggatcacacatacagcaagcacatgaaatcggaccctcacctgcacccggtc
ctaatgtcagaggccccttggaacacccgagccaaacgagagaggctgactgaactgatg
ttcgaacactacaacatcccagccttcttcctgtgtaaaacagccgttctcactgctttt
gccaatggccgcgccacggggctggtcctggacagcggtgccacgcacaccacggccatc
ccggtgcatgatgggtacgtcctacagcaaggcattgtcaagtcacctctggcaggggac
ttcatctcaatgcagtgccgggagctctttcaggaaatgaatatcgatatcgttcctcca
tacatgatcgcatctaaggaacttgtccgagagggggcgccaccgagctggaaaaagaaa
gagaaattgccaccggtcaccaagtcctggcataactacatgtgcaacgaggtgttccag
gatttccaggcctcggttctgcaggtatcggactccccctatgatgaacaggtcgccgct
cagatgccaactcttcacttcgagatgcccagtggcttcacctcggactacggagcggag
aggctgcggattccggaggggttgttcgacccctccaacgtgaaggggctgtctgggaac
accatgctgggggcgggacacgttgtgaccaccagcatcgggatgtgtgacatcgacatc
cggcccggtctctatggcagtgtcatcgtcaccgggggcaacactctcctgcaggggttc
actgaccggctgactcgggaactgtcacagaaaacccccccaagtatgcgtctcaagctg
attgccagtaacagctctgtggagcgtcgcttcagtccctggataggaggctccatcctg
gcttcactgggcacgtttcagcagatgtggatttcgaagcaggagtacgaggaggggggc
aagcagagcgtggagaggaagtgtccctga
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