Polyodon spathula (Mississippi paddlefish): 121305620
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Entry
121305620 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 15-like
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121305620
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121305620
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
121305620
NCBI-ProteinID:
XP_041093238
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Position
44:complement(2675929..2693070)
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AA seq
947 aa
AA seq
DB search
MSVAESMPLPQPHPRERRSRPTVKPKPAVPSKQSLSSSPENGPREPALPLLPNETRRPLA
VAGRAEERESGGKVQRILNQFRQQEKENVVKDAEKCPPPVSAKPPKPLRGAPAKQTELEK
PPLPPKERRQEQGEREASPGREGDDKPVPDGQEAESKLQSNSSSVEAGRSLSPPGGCRRD
CSCLCHQKRAGMILVWVPVGESQGEEEDRDTDSFSEEGTQLVQDSPAEGQSSSSSQSSQS
SLGIPESFPTYSGTVRMTCRAPSLDTLKTETPDSPSEEESIYESTIETYRPEVAPETVRP
VAKEMVARVPKPPRKGRQFPQAFSSTEREEEEEPPPALPPRLPRKPPRPASAPHGGQGAV
LQTEGRQSINLTPGSPAVIRRPCSLSPEEGVLSSLSRDTSKDEGDEIGSDWDELGDIKDI
SEPILSRRVSIDWEAKLQDEPLYQTYRESVISKEIRRQSVSRNLSKTSWDYSSEPWSQGP
PRGQVRTGPPQSSLWQELQSVRESGVLEELTLAECKFQESMFEVLTSEASYLRSLNVLTD
HFLDSRDLSDTIIIRERKILFSNITRVKEVSERFLKNLEERVEESLVISDICDIIHYHAQ
HHFPVYIDYVRNQIYQEKTYSALMETNVQFASVITRLQESPQCQRLPFMSFLLLPFQRIT
RIRMLVENILKRTEEGSSKEQTASKALVSVSKIIAECNSEVGKMKQVEELIHIAKRVEFD
KLKALPLISQTRYLEKRGELSEVVRGGTLFSSRPRFSPVYLFLFNDLLLITNKKSGDRYV
VVDHAHRSLVQVQSNKEASLGPGLDHCFYLTLLENHQGKMMERLLKAPNQSDMHRWMAAF
PNPGDPEKCNDETVYEDWDCPQVQCIEAYSAQQADELSLERTDVVNVLRKTTEGWCEGIR
LTDGQRGWFPGSNVQEITNEHVRRRNLRERYRVIQAAEQLTKSRTTS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgctgaatctatgcccctcccccagccacacccccgtgagaggcggtcccgc
cccacagtcaaaccaaaacccgccgtcccgagcaaacagagcctctccagctcccctgag
aacggaccgagagagccagccctgcccctcctcccgaacgagacacggcgccccctagca
gttgcggggagagcggaggagagagagagcggcgggaaggtgcagaggattctgaatcag
ttcagacagcaggagaaggagaacgtcgtgaaggacgctgagaaatgcccccctcccgtt
tccgccaagccccccaaaccgctcaggggggcccccgccaagcagactgagctggaaaag
ccccccctccctcccaaagaaaggagacaagagcagggggagcgtgaggcatcaccgggc
agagagggggacgacaaaccagtcccagatgggcaggaggcagaatccaaactccagtca
aacagcagcagcgtggaggcaggcagatctctgtctccccccggtggctgcaggagggac
tgctcttgtctgtgtcaccagaagcgggctggaatgattctcgtgtgggtgccagtggga
gagtctcagggagaggaggaagacagggacacagactccttctcagaggaggggacccag
ctggtccaggacagcccagctgagggtcagtccagctccagctcccagagttcccagtcc
tctttgggaatacctgaaagctttccgacgtattctggaacagtccggatgacttgcaga
gcgcccagccttgacacattgaaaacagagacccccgactccccctccgaggaggaatcc
atctacgagtcaaccatcgaaacctataggcctgaggtcgccccagaaacggttaggccc
gtcgccaaggaaatggtggccagggttccgaagcctcccaggaagggcaggcagttcccc
caggctttctcgtcgacggagagagaggaggaggaggagccgccccctgcactccccccc
agactgcctcgcaagcccccccggccagcctcggcgccacatggtggccagggagcggta
ctgcagacggaggggcggcaatctatcaatctcaccccgggcagccccgctgtgatcaga
cggccctgctccctgagtccagaggaaggggtcctgtcttcattgtcccgggacacctct
aaagatgagggagatgagatcggcagtgactgggatgaactgggtgatataaaggacatc
agtgagccgattctatctcgtcgagtgtcgatagactgggaggccaaactgcaggatgag
ccgctgtaccagacctaccgggagtcggtcatttccaaggagatcaggcggcagtctgtg
tcccgcaacctcagcaagaccagctgggactacagcagcgagccctggagccaggggcca
cctcggggccaggtccggacggggccccctcagagctccctgtggcaggagctgcagtcc
gtgcgggagagcggggtgctggaggagctgaccctcgcagagtgcaaattccaggagagc
atgttcgaggtcctgacgtccgaagcctcgtacctgcgctctctcaacgtgctgacagat
cacttcctggactcgcgggatctcagcgacaccatcatcatccgcgagaggaagatcctc
ttttccaacatcacccgggtcaaggaggtcagcgagaggttcctgaagaatctggaggag
agggtggaggagagccttgtgatctcggatatctgcgatattatccattaccacgcccag
caccacttcccggtgtacatcgactacgtgaggaaccagatctaccaggagaagacctac
agcgccctcatggagacgaatgtgcagtttgcctcagtgatcactcgtctgcaggagtcc
ccacagtgccagcggctgcccttcatgtccttcctgctgcttcccttccagagaatcacc
cgcatcaggatgctggtggagaatatcttgaagaggacagaggagggatctagcaaagag
cagactgcttccaaagccctggtctctgtgtccaagatcatcgcggagtgcaacagcgag
gtggggaagatgaaacaggtggaggagctgatccacatcgccaagagagtggagttcgac
aagctgaaagccctgcctctcatctctcagacccggtacctggagaagcgaggggagctg
tcggaggtggtgagggggggcaccctgttcagctccaggcccaggttcagcccggtctac
ctcttcctcttcaatgacctgcttctcatcaccaacaagaagagtggtgatcgctatgtt
gtggttgatcatgcccatcgatctctggttcaggttcagtccaataaggaggcgtctctg
ggtcccgggctggatcactgcttctatttgaccctactggagaaccaccagggcaagatg
atggagcgtcttctcaaagcaccgaaccagtcagatatgcatcgctggatggcagcgttc
cctaatcctggtgatccagagaaatgcaatgatgagactgtttatgaggattgggactgt
ccacaggtgcagtgtatcgaggcatactcagcccagcaggctgacgagttgagtctggag
cgcaccgatgtcgtcaatgtgctgaggaaaacgacagaaggttggtgtgaagggattcgc
ctgactgatggtcagaggggctggttcccgggcagcaatgtccaggagatcaccaacgag
cacgtgcgccggcggaacctccgcgagcgctaccgggtcatccaggcggccgagcagctg
accaagagcaggaccacctcctag
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