Polyodon spathula (Mississippi paddlefish): 121305870
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Entry
121305870 CDS
T07273
Name
(RefSeq) tubby protein homolog
KO
K19600
tubby and related proteins
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121305870
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121305870
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121305870
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Tubby family proteins
121305870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
DUF3527
Motif
Other DBs
NCBI-GeneID:
121305870
NCBI-ProteinID:
XP_041093458
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All DBs
Position
45:1118743..1143593
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AA seq
597 aa
AA seq
DB search
MNGGDSRLAPPLACCSAQRCLLLEGGAELQSKRGRWSHNWGPESNRFESLFCSSAMEEEA
ASVRQERQERLQNQRTLLERRQQRRRQETCMVQANPDLRVKSWKPKRVEGEGADLISEPP
LEEISLADLTLASTTATTETTESQSQARKNRKKDREQEAADLLREQAGGWRGGTVRQAET
KLLTKKAAVKIEKKLKQRAGEETGAIAALTRKTSASQKPTKKQKSQSASKNSKKSGNSQN
RDQLKGLDGPAGFEDPVPEIGGSEEWSDEEKGERENGDYPQSPMKKKKLPVRVMLWDEKA
RAPIIEIDQFNTDPQPEEALFREAAQKQKKRSVREEEEEEGSSGSEDDESRDSCSLAPFN
SNSKHRSTDSDATSRLEFQDLEEFALRPAPKERTVCCRLTRDKKGVEKGIYPTYYLHLER
EDGKRVFLMAGRKRKKSKTSNYLISIDPTDLSRDGKSYIGKVRSNVMGTKFTVYDRGENP
EKKPFVKESETIRQELAAVCYKTNVLGFRGPRKMTVIIPAMDLEERVTIRPMNARGQSRY
GGAPRPLSTLPLSAEYIVMQFGRVAEDVFTMDYSFPMCALQAFSITLSSFHSKIACE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcgatagccgcttggccccgcccctcgcttgctgcagcgcgcagagatgc
ctgctgctggagggaggggccgaactccaatcaaagaggggccgctggagccacaactgg
ggccccgaatcaaacagatttgaaagtctgttctgttccagtgcaatggaagaggaggca
gcaagtgtgagacaagagagacaagagagactacagaaccagcgcactctgctggagaga
aggcagcagcgcaggaggcaggagacttgcatggttcaggccaatcctgacctgagagtg
aagagctggaagcctaagagggtggagggggagggggctgacctcatctccgagcctcca
ttggaggagatctctctcgctgacctcactcttgcctcgacgaccgctaccacggagacc
acagagagccaatcacaggccaggaagaacaggaagaaggacagggaacaggaagcagct
gaccttctaagagagcaggcgggcgggtggaggggagggactgtgcgccaagcggaaacc
aaactgctcaccaagaaagctgcggtcaagatagagaagaaattgaagcagcgggcgggt
gaggagactggcgccattgcagctctgacaagaaaaacctctgcatctcagaaaccaaca
aagaaacaaaaatcccagtctgcatcaaaaaacagcaagaaatcaggcaattcccagaac
agagaccagttaaaagggctcgatggtccggctgggttcgaggaccctgtcccggagatt
ggggggtcagaggagtggagcgatgaagagaagggggagagggagaatggagactaccca
caatcccccatgaagaagaaaaaactaccagtgagagtcatgctgtgggatgagaaagcg
cgtgcgcccattatagagatcgaccagttcaatactgaccctcaaccagaggaggcgctg
ttcagagaggcagctcagaaacagaagaagaggagtgtaagagaggaggaggaggaagaa
ggctcttctggctcggaggatgatgagtcgagagactcctgcagcctggctcctttcaac
agtaattccaaacatcgatctacagacagcgatgcgactagcaggctggaattccaggat
ctggaggagtttgccctaaggccagctcccaaagaaaggacggtgtgctgtagactgacc
agagacaagaagggagtggaaaaggggatctacccaacatactacttgcacctggagaga
gaggacgggaagagagtgtttctgatggccggcaggaaacggaagaaaagcaaaacatcg
aactacctgatttcaatcgacccgactgacctgtcgagagacgggaagagttacattggc
aaagtgaggtccaatgtgatgggtacaaagttcacggtttatgatcgaggtgagaatccg
gagaagaaaccattcgttaaagagagcgagacgatccgacaagagctcgcagccgtctgc
tacaagacaaatgtccttgggttccgtggtcctcggaaaatgaccgtcatcattccagcg
atggacctggaggagagagtgaccatccggcccatgaacgcgaggggccagtctcgttac
gggggagcccctcgccccctctccaccctccctctttcagctgaatacattgtgatgcag
tttggacgcgttgctgaggacgtgttcaccatggactacagcttccctatgtgtgcactg
caggccttcagtatcactctgagcagcttccacagcaagatagcctgcgaataa
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