Polyodon spathula (Mississippi paddlefish): 121305930
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Entry
121305930 CDS
T07273
Name
(RefSeq) zinc finger protein 436-like isoform X1
KO
K09230
SCAN domain-containing zinc finger protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121305930
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121305930
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Zn_ribbon_8
zf-C2H2_11
DUF7838
zf-C2HC_2
XPA_N
Motif
Other DBs
NCBI-GeneID:
121305930
NCBI-ProteinID:
XP_041093537
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All DBs
Position
45:799013..807077
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AA seq
684 aa
AA seq
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MAQRCAVQSCGNSHSTGHSLHAFPREPSTRLLWVKFVQAKRADFQGVARCPVICGAHFSP
DSFINDLKFSMGFSKTRRLERGAVPTIQPVPKGPQLGSENKGDRGRLSSAPLCLPQAGGK
EPRFTKAVHGMEVARLVKDGDTRGDGEQSPVPASSALTMRTDQPRSQGVSEMEAAHVSPE
LPIRWVVSADRTVEIKEEVTELGCDQANERILQEETPPSSITERGAEATFVNLGRRQESE
TASSHIKEETPELEPVPIKEETPELEPVPIKEESPALESAEWEHLSACNVDEGGQDPTAS
PYCKNPSSGKPQSKKHRETTPREENVKHWRVQIPSVGVSFVLESTETADSACVNNSETQG
SLKTLSCSTEDGKSSRRLGCPKTRKGKQTGGTAFPCADCGKSFSELSNLKRHQRVHTGEK
PHHCKDCGKRFSRSEYLKAHQHVHTGEKPHRCSDCGKSFTLLGNLTKHQRTHTREKPHRC
KECGKRFSQSEYLKAHQQTHTREKPHCCKDCGKSFSRSVYLKAHQLIHIREKLHRCSYCG
RSFTQLGSLKTHQLIHIGEKPHRCSDCGRSFTQLGSLKTHQLIHTGEKPHRCSDCGKCFT
QLGNLTKHQRTHTGEKPHRCSECGRSFARIDNLKMHQLLHTGEKPHHCSDCGKSFSELRR
LKKHSLIHTAVKPWRLNVQNIFIW
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaggtgtgctgtccagtcctgcgggaactctcacagtaccgggcacagcctg
cacgcattcccgagagagccctccacacggcttctgtgggtcaagtttgtgcaggcaaag
agagcagacttccagggagtcgctcgctgtccggttatctgtggagcgcatttctccccc
gacagttttataaatgaccttaaattttcaatggggttctctaagacgaggcggctggag
agaggggcggtccccactattcaacccgtcccgaaagggccccagctgggatccgagaat
aagggagacagagggagactctcatcggcacctctctgtctgccccaagcggggggaaag
gagccccgtttcaccaaagcggtccatggcatggaagttgcaaggcttgtgaaggatggc
gataccagaggtgatggtgaacaaagtccagtccctgcctcttcagctttgacaatgaga
acggatcagcctcgctcacagggagtttctgagatggaagcagctcacgtcagcccagag
cttcctattcgatgggttgtttctgcagacaggactgttgagatcaaggaggaagtgact
gagctggggtgcgaccaggccaatgagcggatcctgcaggaggaaacaccaccttctagc
atcactgagagaggtgctgaggcgacatttgtaaatcttggtaggagacaagaatcagaa
acggcatcttctcacattaaagaggagaccccagaactggaacctgtccccattaaagag
gagaccccagaactggaacccgtccccattaaagaggagagtcctgcgctagaatcagca
gaatgggaacacctttcagcttgtaatgtcgatgaaggagggcaggaccccactgcatca
ccctactgcaaaaacccttccagtggcaaaccgcagagcaagaaacacagagagacgaca
ccccgagaagagaatgtaaaacactggagagtccagattccttctgtaggagtgtcgttt
gttctggagagtacagagactgcagattctgcatgtgtgaacaattctgaaacccagggc
agcttgaagaccttgtcttgttctactgaagatgggaagagttcccggcgattaggctgt
cctaaaactcgcaagggaaagcagacaggagggactgcatttccctgtgctgactgtggg
aagagtttcagtgagttatcaaaccttaaaagacaccagcgtgttcacacaggagagaaa
ccacaccactgtaaggattgtgggaaaaggttctctcgatcagagtatcttaaagcacac
cagcatgttcacacaggagagaaaccacaccgctgtagtgattgtgggaagagcttcact
ctgttaggaaatcttacaaaacaccaacgaactcacacaagagagaaaccacaccgctgt
aaggaatgtgggaaaaggttctctcaatcagaatatcttaaagcacaccagcaaactcac
acaagagagaaaccacactgctgtaaggattgtgggaagagcttctctcgatcagtatat
cttaaagcacaccaactaattcacattagagagaaactacaccgctgtagttattgtggg
agaagtttcactcagctaggaagtcttaaaacacaccaactaattcacattggagagaaa
ccacaccgctgtagtgattgtgggagaagtttcactcagctaggaagtcttaaaacacac
caactaattcacacaggagagaaaccacaccgctgtagtgattgtgggaagtgtttcact
cagctaggaaatcttacaaaacaccaacgaactcacacaggagagaaaccacaccgctgc
agtgaatgtgggagaagcttcgctcgaatagacaatcttaaaatgcaccaactccttcac
acaggagagaaaccacaccactgcagtgattgtgggaagagcttcagtgaattaagaaga
cttaaaaaacacagtttaattcacacagcagtgaaaccctggaggctgaatgttcagaac
attttcatctggtga
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