Polyodon spathula (Mississippi paddlefish): 121306116
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Entry
121306116 CDS
T07273
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121306116
04371 Apelin signaling pathway
121306116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121306116
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121306116
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121306116
NCBI-ProteinID:
XP_041093770
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Position
2:103592611..103669054
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AA seq
461 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESDDKYRKI
NEDIDLMISRQRLCAVQPNYEMPVSIPVSNPNNLIYNHPGSSLGNHNLLPLAHPSLQRNS
MSPGVTHRPPSAGGMLGADLSTGAGISAGNGYGNHRNSPGLLVSPGSMNKNMQAKSPPPM
NLGMNNRKPDLRVLIPPGSKNTMPSINQRINNSQSAQSLATPVVSVATPTLSGQGMGGYP
SSISTTYGTEYSLSSADLSSLSGFNSASGLHLGSVTGWQQQQLHNMQHSALSQLGTCTSS
HLSQNLSLPSTQSLHIKSEPVSPPRDRTTSTPSGYPLHHSRHDSGRSPVDSLSSCSSSYE
GSDREDHRNDFHSPLGLIRTSQDERESPSVKRVRLSEGWAT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatcacacggattatggatgagcgtaatagacaggtgacg
tttacaaagagaaagtttgggttaatgaagaaggcctatgagcttagtgtactgtgtgac
tgtgagatcgctctcatcatcttcaacagcaccaacaaactgttccagtatgccagcact
gatatggacaaagttctgttgaaatacacagagtacaatgagccacacgagagtcgaaca
aactctgacattgttgagacgttgagaaagaaaggactgaatggctgtgacagcccagac
cctgatgcagacgattcagtagggcacagccctgagtctgacgacaagtacaggaaaatt
aatgaagatattgatctaatgatcagcagacagagattatgtgcggttcaacctaactat
gagatgccagtctctatcccagtgagcaaccctaacaacctgatatacaaccacccaggc
agctcactgggcaaccacaacctgctgccactggctcacccgtccctgcagaggaacagc
atgtctccaggtgtgacgcatcggccacccagtgcaggtggcatgttgggtgcggacctc
tcgaccggtgcaggcatcagtgctggaaacggatatggaaatcatcgtaattcaccaggt
ttgctggtctcacctggaagcatgaacaagaacatgcaagcaaagtcaccaccacccatg
aacctggggatgaacaatcgcaagcctgacctgcgtgtgctcattccaccaggctccaag
aacaccatgccatccattaatcagagaataaacaactctcagtctgcacagtcattggcc
actcctgtggtttctgtagcaacccctactctgtcagggcaaggaatgggtggataccca
tcatccatttctaccacatatggtactgaatactccttgagcagtgcagatctgtcctcc
ctctccgggttcaacagtgccagtggccttcacctgggctcagtgactggctggcagcag
cagcaactgcacaacatgcagcactcagccctcagccagttaggaacttgtactagctct
cacttatctcagaatctctccctgccttctactcaaagcctccacatcaagtcagaacct
gtttctcctcctagagaccgcaccaccagcacgccgtcggggtaccccctgcaccactct
cgccacgactccgggaggtctccggttgacagtctgagcagctgcagcagctcctacgag
ggcagcgaccgggaggaccaccggaacgacttccactccccgctcggactcatcaggacc
tcgcaggacgagagggagagcccgtcagtgaagcgcgtcaggctgtctgagggatgggcc
acatga
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