Polyodon spathula (Mississippi paddlefish): 121306130
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Entry
121306130 CDS
T07273
Symbol
sgsm3
Name
(RefSeq) small G protein signaling modulator 3 isoform X1
KO
K20176
small G protein signaling modulator 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121306130 (sgsm3)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121306130 (sgsm3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
121306130
NCBI-ProteinID:
XP_041093783
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Position
46:complement(1284448..1297405)
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AA seq
760 aa
AA seq
DB search
MSGGFTPAPGGPFSALTPSMWPQDILAKYCQKEDTDDQPQVRYDEFGFRVEEEDGGEQPQ
SGRLLGAPLSEDPQQRLRWQAHLEFTHNHDVGDLTWDRIDASLPRSDKLRALVLTGIPHS
MRPQIWMRLSGALQKKRSSEMSYREIVKNSSNEETLSAKQIEKDLLRTMPSNACFCNMNS
VGVPRLRRILRGLAWLYPDIGYCQGTGMVVSSLLLFLDEEDSFWMLVALIEDLLPASYFS
HTLLGVQTDQRVLRQLLAQRLPRLDKLLQEHDIELSLITLHWFLTSFASVLHIRLLLRVW
DLFFYQGSVVLFQIALGMLSIKQDELVQSENSASIFNLLSDLPSGLGDPSLLLGESMRVA
GSLGDPLIESQRRKHLAYIIAEQGQPANQHAAIAATAHNTNLSKIVRRASGRRKSTISSL
LFGENNSEALKAKNIKQTELVADMRESIARVAKHFQSLDPRDCSMDLTPDYTTESHQKDH
ENFVLVSRNRRRRAKALLDFERHDDDELGFRKNDIITIVSQKDEHCWVGELNGLRGWFPA
KFVEILDERSKEYSIAGDDSVTEGVTDLVRGSLCPSLKAIFEHGLKKPSILGGPCHPWLF
IEEAAGREVERDFDSVYSRLVLCKTYRLDEDGKVLTPEELLYRAVQSINMSHDAAQTQMD
VKFRSLICVGLNEQVLHLWLEVLCSSVPSVEKWYQPWSFLRSPGWVQIKCELRVLSKFAF
SLSQDYELQTRKEEKERKPLKEGVQDMLVKHHLFSWDIDG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggcttcactcccgcccctgggggccccttctccgctctcaccccgagtatg
tggccccaagacatcctcgccaaatattgccagaaagaagacacagacgaccagccgcag
gtccgatacgatgagtttggattccgagtggaggaggaagatggcggcgagcagccccag
tccggccggctcctcggggcccccctgtccgaggacccccagcagaggctgcgctggcag
gcccacctggagttcactcacaaccacgacgtgggagatctgacctgggaccggatcgac
gcgagcctgccccggtccgacaagcttagagcgctggtgctgaccggcatccctcacagc
atgagaccacagatttggatgcgtctctccggcgctctgcagaagaagcgcagctcggag
atgtcataccgagagattgtgaagaacagttcaaacgaggagaccctgtctgcgaaacag
attgagaaggacctcttgaggactatgcccagcaatgcttgcttctgcaacatgaacagc
gtgggggtcccccggctgcggaggattctgcgggggctggcctggctgtaccccgacatt
gggtactgccaggggacgggcatggtggtctcctctctcctcctcttcctcgatgaagag
gactcgttttggatgctggttgctctgattgaggatctgctccccgcctcctatttcagc
cacaccctgctgggggtgcagaccgaccagcgagtcctgagacagctcctggcgcagaga
ctaccgagactggacaagctgctgcaggagcacgacatcgagctctctctcatcactctg
cactggttcctcacctccttcgccagcgtgcttcacatcaggctgctcctgcgagtctgg
gacctcttcttctaccagggctccgtggtgctgttccagatcgcactgggcatgctcagc
atcaagcaggacgagctagttcaatcagagaactccgcctccatcttcaacctcctctcc
gacctgccctctgggctgggggacccctcccttctcctgggggagtccatgcgagtagcc
ggctcgctgggggaccccctgatcgaaagccagcgccggaagcacctcgcttacatcatc
gcggagcagggccagccggccaatcagcacgcagccatcgctgccaccgcacacaacact
aacctgtccaagatcgtgcggcgggcgagcgggcgcaggaagtccacgatcagctccctg
ttgttcggggagaacaactccgaagccctgaaggccaaaaacatcaaacagacggagctg
gtggcggacatgagagagtcgatcgctcgggtagcgaagcacttccagagcctggacccc
cgggactgcagcatggacctcactccagactacaccacagagtctcaccagaaagaccac
gagaactttgtgctggtgtcccgtaaccgtcggcgacgggcgaaggcgctcctggacttc
gagagacacgacgacgacgagctggggttccgcaagaatgacatcatcacgatcgtctct
cagaaggatgagcattgctgggtcggggagctgaacggactgagaggctggtttcctgcc
aaattcgtggagattctggatgagcgcagcaaagagtactcgatcgctggtgatgactct
gtcacagagggggtcactgacctggttcgggggtccctgtgtccgagcctcaaagcgatc
ttcgagcacggactgaagaagccctccatcctgggggggccctgtcacccctggctcttc
atcgaagaggctgcagggagggaagttgaaagagattttgactctgtttactccagactg
gtcctctgcaagacttacaggttggatgaagatggtaaagtcttgactcctgaggagttg
ctgtacagggctgtccagtctatcaatatgagtcatgatgccgcacagactcagatggac
gtgaagttcagatctctgatctgcgtgggattgaatgagcaggttcttcacctgtggctc
gaggttctgtgctccagtgtgccgagcgtggagaagtggtaccagccctggtccttcctg
agaagcccgggctgggtccagatcaagtgtgagctcagagtgctgtccaagttcgccttc
agcctttcacaagactacgaactgcagacgagaaaagaggaaaaggagaggaagccgctg
aaggaaggcgttcaggacatgctggtgaagcaccacctgttcagctgggacatcgatggc
tga
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