Polyodon spathula (Mississippi paddlefish): 121306133
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Entry
121306133 CDS
T07273
Symbol
ttc26
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121306133 (ttc26)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121306133 (ttc26)
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Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_2
TPR_16
TPR_9
TPR_8
Fis1_TPR_C
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
121306133
NCBI-ProteinID:
XP_041093790
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Position
46:complement(1180187..1187432)
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AA seq
618 aa
AA seq
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MICLGGERSFSALVLLAGRCRRVPVPVREFQALLGDGLRGSDFIIFILLSFSPQKQLYPQ
QRLNMMLSRVKPAVGGEPVQGDKKKKKGKKIPKLEEYMSQRDYMGALTLLEFKRSIGERE
EELDLWIAYCAFHLGDYKRAMEEYSSLSLKEGCHPDVWVGLSCTYFFLGMYKEAEEAALK
APKSRLQNRLLFHLAHKFNDEKKLMNFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKR
ILLDNREFLALNVYVALCYYKLDYYDVSQEVLAVYLQHVPDSTIALNLKACNHFRLYNGK
AAEAELKTLIDIASTSFDFAKELIRHNLVVFRGGEGALQVLPPLIDVIPEARLNLVIYYL
RQDDVQEAYNLIKDLEPSTPQEYILKGVVNAALGQEMGSRDHLKIAQQFFQLVGGSASEC
DTIPGRQCMASCFFLLKQFEDVLIYLNSVKSYFYNDDMFNFNYAQAKAAVGNYKEAEEVF
LLIQSEKIRSDYTYLSWLCRCYIMNKKPRQAWELYLKMETSAESFSLLQLIANECYKMGQ
FYYSAKAFDVLERLDPNPEFWEGKRGACVGIFQMILAGKEPRETLREVLPLLRNTGNPQV
EYIIRILKKWGKENRVAV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcctcgggggggaacgaagtttctctgcattagtgttgttagccggacgatgc
cgacgtgtcccggttccggtgagggagtttcaggcgttgctaggagacgggctgcgtggg
tctgattttataatatttattttattaagtttttctcctcagaagcagctttatccccaa
cagcgtctcaacatgatgctgtctcgcgtgaagccggcggtcgggggggagcccgttcaa
ggagacaagaaaaagaaaaaagggaaaaaaatccccaaactggaggagtacatgagccag
agagactacatgggggctctgaccctgctggagttcaagcgcagtatcggggagagagag
gaggaactggatctgtggatcgcatactgtgcctttcacctgggggattacaagagggct
atggaggagtacagctccctctctctgaaggagggctgtcaccctgatgtctgggtcggt
ctgtcctgcacgtacttcttcctgggcatgtacaaggaggctgaggaggcagcactgaag
gctccgaagtctcgtctgcagaatcggctcctgttccacttggctcacaagttcaacgat
gagaagaagctgatgaactttcaccagaacctgcaggacgtaaccgaggaccagctgagc
ctggcctccattcattacatgaggtcccactaccaggaggccatagacatctacaagagg
atactgctggacaacagggagttcctggccctcaatgtctacgtggctctgtgctattac
aagctggactattacgatgtctctcaggaggtcctggctgtctacctgcagcacgttcct
gacagcaccatcgccctgaacctgaaagcgtgcaaccacttccgcctgtacaacggcaag
gcagcagaggctgagttgaagactctgattgatatcgcctccacctccttcgacttcgcc
aaagagctcatccgacacaacctggtggtgtttcgaggaggggagggggctctgcaagtc
ctgccccccctgattgatgtcattcctgaagccagactgaacctcgttatctattacctg
agacaagacgacgtgcaggaagcctacaatctcatcaaagacctggagccttccacccca
caggagtacattctgaagggagtggtgaacgcagcattagggcaggagatggggtcgaga
gatcatctcaagatcgctcagcagttcttccagctcgtgggcggctcagccagcgagtgc
gacactattcctggaaggcagtgtatggcttcgtgcttcttcctgctcaagcagtttgaa
gacgtcctcatctacctgaactctgtcaagagttatttctataatgacgacatgttcaac
ttcaactacgcccaggccaaggcagccgtgggaaactacaaggaggcagaggaggtgttt
ctgctgattcaaagtgagaagatccggtctgactacacctacctgagctggctgtgccgc
tgctacatcatgaataagaaacctcgccaggcctgggagctgtacctgaagatggagacg
tcggccgagtccttcagtctgctgcagctcatcgcaaacgagtgctacaagatgggtcag
ttttattattctgcgaaggccttcgatgttctggagaggctcgacccgaacccggagttc
tgggaggggaagcggggagcctgcgtggggatcttccagatgatactggctgggaaagag
ccacgggagactcttcgggaggtgctgcctctgctcaggaacacagggaacccgcaggtc
gagtacatcatccgaatcctgaagaaatggggcaaagagaaccgggtcgctgtgtga
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