Polyodon spathula (Mississippi paddlefish): 121306164
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Entry
121306164 CDS
T07273
Name
(RefSeq) platelet-derived growth factor subunit B-like isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
pspa04540
Gap junction
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121306164
04020 Calcium signaling pathway
121306164
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121306164
04540 Gap junction
121306164
09142 Cell motility
04810 Regulation of actin cytoskeleton
121306164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121306164
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121306164
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121306164
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121306164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
121306164
NCBI-ProteinID:
XP_041093840
LinkDB
All DBs
Position
46:complement(1593853..1613926)
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AA seq
251 aa
AA seq
DB search
MYSQSCELKSRRHDAFGSIARVFHLLPDVCHLAGGQDSRGDSPETPKQCDPFHPGPAANF
ADRLQEDSLPDQAVSFRWQLRSNSSLSRVVRSPQGLAAEAEMAMPAQCQPRTEVLELTRG
MVDRSNTNFLVWPLCVEVQRCSGCCNTHNMHCIPTRVQPRHLQVVKIEYMQGKPRNGKAQ
VTVEDHLECRCESIAPQRSAQHSKHKPAVTTVPVMTPPRVTQPRSKKLLRRKHRKLKHIS
QKAALKERLPR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtcaatcttgcgaactgaaatcgaggcggcacgatgcatttgggagcattgct
cgtgtctttcacttgctacctgacgtttgccatctcgcagggggacaagattcccgaggc
gatagtccggaaactccgaagcagtgcgatccattccatccaggacctgcagcgaatttt
gcagatagactccaggaagattcactgcctgaccaggctgtgtcattcagatggcagctg
agatccaactccagcttgagtagagtggtgcgcagtccacagggcctggcggcagaagcg
gaaatggccatgcctgcgcagtgccagcctcgcaccgaggtcctggagctcaccagaggc
atggtggaccgcagcaacaccaacttcctggtgtggccgctctgcgtagaggtgcagcgc
tgctcagggtgctgcaacactcacaacatgcactgcattcccacccgagtgcagccacgc
cacctacaggtggtgaagattgaatacatgcaggggaaaccccgcaatgggaaggcgcag
gttactgtggaggaccacctggagtgtcggtgtgagagcatcgccccccagcgctcggca
cagcactccaaacacaaaccagcagtcacgacggtccctgtgatgacaccccctagagtc
acgcagccccgatcgaagaagctcctcaggaggaaacaccgcaagttaaaacacatctcc
cagaaggcagcgctgaaagagcggctacccagatag
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