Polyodon spathula (Mississippi paddlefish): 121306176
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Entry
121306176 CDS
T07273
Name
(RefSeq) tumor necrosis factor receptor superfamily member 13C-like
KO
K05151
tumor necrosis factor receptor superfamily member 13C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121306176
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121306176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121306176
04090 CD molecules [BR:
pspa04090
]
121306176
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121306176
CD molecules [BR:
pspa04090
]
Proteins
121306176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
121306176
NCBI-ProteinID:
XP_041093857
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All DBs
Position
46:689548..693276
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AA seq
191 aa
AA seq
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MSTRDCRPPQFWDSLVNECVARHFKKKATTFPQPRSSLTPLTVDRPTLSVESPLHPDPGA
ALVSVAVLACGSLLAMLVWLVMCRRQTRRQTAGRQNDPEDLAKTPEFQPGVVVSDENETS
CPLVNGLPPGTKNQEPPEGASVTPGEPFVCGTGSEVRVGPCDGGLCNSIPLPATELGGSA
LVTTKTVRNSE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagggattgccgaccaccccaattttgggatagtttagttaatgaatgtgtt
gcgcgtcattttaagaaaaaggcgaccacgttcccacaacccaggtccagcctcacgccc
ttgaccgtggaccggcccacgttgtccgtggaaagcccactgcacccagatccgggcgcg
gctctcgtatcggtggctgtgctggcgtgcggctcccttctcgcgatgcttgtgtggctg
gtgatgtgcaggaggcagacaaggagacagactgctggcagacagaatgacccggaagat
ctagccaagactccggaattccaaccaggggtcgtcgtctcggatgaaaacgaaacttcc
tgtccgctggtcaacggactcccgccgggaactaaaaatcaggaacctcctgagggggcg
tccgttacccccggggagccatttgtgtgcggcacaggaagtgaggtccgtgtcggaccg
tgcgacggcggactgtgtaacagcatccctcttcctgccaccgagttgggcggttccgct
ctagtgacgaccaaaaccgttcggaattcagaatga
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