Polyodon spathula (Mississippi paddlefish): 121306204
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Entry
121306204 CDS
T07273
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 2
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121306204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121306204
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306204
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121306204
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121306204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-FCS_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
121306204
NCBI-ProteinID:
XP_041093894
LinkDB
All DBs
Position
46:complement(861010..872393)
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AA seq
706 aa
AA seq
DB search
MEEGEWGELSSSPGYEDDSLDLEDLQLFGGYDSPGPPRSDEGSTRFEEEEEEEEEEEGSL
TAAPARRPQTPPPPLHTHRTQDESHEPAVCEMCGIVGTRDSFFSKTKRFCSVSCSRSYSS
NSKKASILARLQGKPPTKKAKVLHKAAWSTKIGAFLHSQGIGQLLDGTRTGQDAFVMGFD
WGSYLRESSDKAAPVSCFKHVPLFDQWDDVVLGMKVEVINNDAVLPSKVYWIAYIVKLAG
YKALLRYEGFEGDSSHDFWCNLGTVDIHPIGWCAVNSKLLVPPQTVHQRIRDWKAFLTRR
LVGAKTLPVDFYIKMADSMKYPFRQGMRVEVVDGTQLSRTRTAVVDAVIGGRLRLLYEDG
QGDTEFWCHMWSPLVHFVGWSKRVGHESKKFGERERASQSPLGSNPRTVLRLQVRSVYTE
GGFFEEGMKLEAIDPLNLGSICVATVHKVLLDGYLMVGMDYSETLGGADWFCYHASSHAI
FPVGFCERNQIDLTLPKNYNKTSFSWPKYLEDTASKPAPSRLFNMDCPSHGFEAGMKLEA
VDLMDPRLICVATVRRVVSRLLRVHFDGWDEEFDQWVDCESSDIYPVGWCEITGYQLQPP
VSPEESTSKSTGKVKNKTSLGKKEKKLMKKKLASLIARNKPPPRLKPRTPAEELSPPAKP
VLDWGVQEGEIIAVKVKEETFDPTIMSGDPHDLQMTPLQIKGEPQD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggcgagtggggtgagctctcttcctctccaggctatgaagatgactctctg
gatctggaagatttgcagctcttcgggggctacgacagcccaggaccccccaggagtgac
gaggggagcacaaggttcgaagaggaagaggaggaggaggaggaggaggaggggtcactg
actgcagccccagccagaagaccacagacccctcctcctcccctccacacacacagaacc
caagacgagagccacgaaccggcggtgtgtgagatgtgtgggatcgttgggacccgggat
tccttcttctctaagactaagaggttctgcagtgtgtcctgctcccggagctactcctcc
aactccaagaaagccagcatcctcgccagactgcagggcaagcctcccacgaagaaagcc
aaggtcctgcacaaggcagcctggtcaacgaagataggagccttccttcattctcaaggc
attggacaactactggatgggacacgaacgggacaggacgcctttgtcatggggtttgac
tggggcagctacctgagggagagcagcgacaaggcagcgccagtgagctgcttcaaacac
gtgcccctgtttgatcagtgggatgatgtcgtgcttgggatgaaggtggaagttattaac
aacgacgctgtgctgcccagcaaggtctactggatcgcctacatcgtcaaactggcaggc
tacaaggctctgctgcgttacgaagggttcgagggcgactccagccacgacttctggtgc
aacttgggaacggtggacatccaccccattggctggtgtgccgtgaacagcaagctgctg
gtgcccccccagacggttcatcagcgcatcagagactggaaagcgttcctcaccaggagg
ctggtcggagcgaagaccctgcctgtggatttctacatcaagatggcagacagtatgaag
tacccgttcaggcaggggatgcgtgtggaggttgtcgatggaacccagctctctcgaacc
cgcactgccgtggtggacgctgtgatcgggggacgcctgcgtctcctctacgaggacgga
cagggggacacggagttctggtgccacatgtggagcccgctggtgcactttgtgggctgg
tccaaacgggtcggccacgagagcaagaagttcggtgagagagagagagcctcccagtcc
cctctcggctctaaccccaggactgttctccggttgcaggttcgatcagtttacactgaa
ggtggtttctttgaagaaggaatgaagttggaggcaatcgatcccctaaatctgggcagc
atttgcgtggctacagtccataaggttctgttggatggatacctcatggttgggatggac
tactccgaaacactagggggcgctgattggttctgctatcacgcctcctctcacgcgatc
ttccccgtggggttctgcgagcgcaaccagatcgacctgaccctgcccaagaattacaac
aagacttccttttcctggccaaaatacctggaagacacggcttcaaagccagctccctct
cgactgttcaacatggactgcccgagtcacgggttcgaggcggggatgaagctggaggca
gtggatctcatggatcctcgtctgatctgtgtggcgacggtgaggagggtcgtgtcccgt
ctcctcagggttcacttcgacggctgggacgaggagtttgatcagtgggtggactgcgag
tcctcagatatctacccagtgggctggtgtgagatcacggggtaccagctacagcccccc
gtctcgccagaagaatcgaccagcaaatccacaggaaaggtgaagaataaaacatcactg
ggaaagaaagagaaaaaactgatgaagaaaaaattagcctcgctgatcgccagaaacaag
cccccccctcgattgaagccccgcaccccagcagaggagctgtcccccccagccaaaccc
gtcctggactggggggtgcaagagggggaaattattgctgtcaaggtgaaagaggagacc
tttgaccccacgattatgagcggcgacccccacgatctccagatgaccccgcttcagatc
aaaggcgaaccccaagactga
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