Polyodon spathula (Mississippi paddlefish): 121306283
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Entry
121306283 CDS
T07273
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121306283 (syvn1)
04120 Ubiquitin mediated proteolysis
121306283 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121306283 (syvn1)
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121306283 (syvn1)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121306283 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
121306283
NCBI-ProteinID:
XP_041093959
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All DBs
Position
47:2087127..2091790
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AA seq
570 aa
AA seq
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LSQVLYIQAFVLIFLLGKFMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSP
RFVGLFTLLLFLKCFHWLAEDRVDFMERSPNISFLFHFRVATLLALLATLDFVFVTHACH
SIMTRGASVQLVFGFEYAILMTMVLTTFIKYFLHTLDLQNDNPWENKAVYMLYTELFTGF
IKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATP
EELQATDNVCIICREEMVTGAKRLPCNHIFHCSCLRSWFQRQQTCPTCRMDVLRATLPNQ
TQAPPPAQQPVPPPPQHQPAPPPANMPQGMMPPFPPGMFPFWGPFPAVAPPAAPPSAVQT
PPETTQPSGAAPSTSRPSQAGQDTPPSAAIPGFPFSFPPPFPSAPWMGMPPPPPFGMSVP
LPPAGFSGLSEEELRLMEGHERRNLEARLQTLQNIHTLLDAAMLQINQYLSVLASMGPPR
PTPPSTDPAEGSERETLPPAGASGNTTDASHVESGGELEGAVGFTPPPPDSTTVGEEEEE
EEEGEGAPSTAELRRRRLRKLETTVPPAEH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ctttctcaggtgctgtacatccaggcctttgtgctcatcttcctgctcgggaagttcatg
cgcaaagtcttcttcggacagctccgcgccgctgagatggagcacctgattgagcgctcc
tggtatgcagtgacagagacctgtcttgccttcaccgttttcagggatgatttctctcct
cgcttcgtggggctcttcaccctcctcctcttcctcaagtgcttccactggctggcggag
gaccgcgttgacttcatggagaggagcccgaacatatccttcctgttccatttcagggtt
gccactctgttggccctgctcgccacgctggactttgtgttcgtgactcacgcctgtcac
agcatcatgactcggggagcctcggtgcagctcgtcttcggattcgagtatgctatcctg
atgacgatggtactgacaactttcatcaagtatttcctgcacaccctcgacctgcagaac
gacaacccgtgggagaacaaggccgtgtacatgctgtacactgagctgttcacagggttc
atcaaggtgcttctctacatggccttcatgacgatcatgatcaaggtgcacaccttccct
ctcttcgctatccggcccatgtacctggccatgaggcagttcaagaaagccgtgacggac
gcggtcatgtcaagaagagcgattcgcaacatgaacacgctgtacccggatgccacgccg
gaggagctgcaggccacggataacgtctgcatcatctgcagggaggagatggtgacggga
gccaagaggctgccctgcaaccacatcttccactgcagttgcctgcgttcctggttccag
cgccagcagacctgccccacgtgtcggatggacgtgcttcgcgccacgctgcccaatcag
acgcaggctccgccccctgcgcagcagccagtcccgccccctccccagcaccaacctgca
cccccgccagccaacatgcctcagggaatgatgcctcccttccctcctgggatgtttcct
ttctggggaccgttccctgctgtggcccctcctgcagcaccccccagcgcagtgcagacg
ccccccgagaccacccagccttccggagcagctcccagtacctctcggcccagccaagct
gggcaggacactcctcccagcgctgctatcccagggttccccttctccttccctcctccc
ttcccatcagccccctggatgggcatgccgccgcccccccccttcgggatgtctgtgccg
ctgccccctgctggtttctccggtctctctgaggaggagctgaggttgatggagggtcac
gagcgcaggaacctggaggcgcgtctgcagactcttcaaaacatccacaccctgctggac
gcggccatgctgcagatcaaccagtacctgagcgtgctggccagcatgggccctcccagg
cccacgccccccagcacagacccagccgaggggtctgagcgcgagacattgccccctgca
ggagcctccgggaacacgaccgacgcctcacacgtggagagtggcggggagctggaaggg
gctgtggggttcaccccccctccccccgactccaccactgtgggagaggaggaggaggag
gaggaggaaggggagggggcaccgagcacagctgagctgcggaggagacgactgcgcaaa
ctggagaccacggtgccccctgctgaacactga
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