Polyodon spathula (Mississippi paddlefish): 121306306
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Entry
121306306 CDS
T07273
Symbol
vegfba
Name
(RefSeq) vascular endothelial growth factor A isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04370
VEGF signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121306306 (vegfba)
04370 VEGF signaling pathway
121306306 (vegfba)
04020 Calcium signaling pathway
121306306 (vegfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121306306 (vegfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121306306 (vegfba)
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121306306 (vegfba)
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121306306 (vegfba)
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121306306 (vegfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
CXCXC
Motif
Other DBs
NCBI-GeneID:
121306306
NCBI-ProteinID:
XP_041093984
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All DBs
Position
47:2488609..2497298
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AA seq
260 aa
AA seq
DB search
METQPSLETAGSLHSSPQRLLCKLAPVLVSVESGIFPRAFAAVTQHENINEGEEAVAPDL
ADSASPAAWLVLPWLDVYNRSFCQPREILVDVSSEFPQEVEHLFLPSCVPLRRCGGCCSD
EAMECTPTRTHTLTVEVPQHARTRSQWRYPNTHAHAHSGGTPTCTHTLTVELMKVKYGRH
KWARLPFTEHSACECRLKKGLTPALPWRQCSGQCSGCVGQWKVLDPMSCECSCRRSPQHC
HRKGKELNLRSCKCESLRKR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcagccctcgttagagacggctggcagcctgcattcctctccacagaggctg
ctgtgtaaactggcaccagtccttgtttctgtagaaagtggaatatttccccgcgcgttt
gctgctgtgacgcaacacgagaacattaatgaaggagaggaagccgtcgctccggatctc
gctgattccgcatcaccggcagcgtggctcgtattgccctggctggatgtgtataatcgc
tcgttttgtcagcctcgcgagatcctggttgacgtctcctccgagttccctcaggaagtg
gagcacctcttcctgccctcctgtgtgccgctgcgtcgctgtggggggtgctgcagtgac
gaggccatggagtgcaccccaacacgcacgcacacgctcacagtggaggtaccccaacac
gcacgcacacgctcacagtggaggtaccccaacacgcacgcacacgctcacagtggaggt
accccaacatgcacgcacacgctcacagtggagctgatgaaggttaagtacggccgtcac
aaatgggcgaggctgcctttcactgagcacagtgcgtgtgagtgcagattaaaaaagggc
ctaacgccagcgctgccatggaggcagtgcagtgggcagtgcagtgggtgtgtggggcag
tggaaggtgttggatccaatgtcctgtgagtgctcgtgtcgacgatctccccagcactgc
cacaggaaggggaaagagctgaacctgcgctcctgcaaatgcgagtccctgagaaaacgc
tga
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