Polyodon spathula (Mississippi paddlefish): 121306332
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Entry
121306332 CDS
T07273
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121306332 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121306332 (taf6l)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306332 (taf6l)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121306332 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
121306332 (taf6l)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121306332 (taf6l)
STAGA complex
121306332 (taf6l)
TFTC complex
121306332 (taf6l)
SAGA complex
121306332 (taf6l)
SLIK complex
121306332 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
121306332
NCBI-ProteinID:
XP_041094017
LinkDB
All DBs
Position
47:complement(1618269..1635232)
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AA seq
631 aa
AA seq
DB search
MADREERKFAEVQRDSVKLMAESTGVELSDDIAAMLAEDVCYRLREAAQNSSQFMRHAKR
RKLTVEDFNRALRWSNVEAVCGYGSQDALPFRPLKEGELYFVEDREINLVELALATNIPK
GCAETMVRVQVSYLDGKGNVEPQGAVPTAVQSLTDDLLKYYQQVTRAILGEDQQLMKVAL
QDLQTNSKIAALLPYFVHVVSGVKSVSHDLEQLSRLLHMVKSLVQNPFLYLGSYIKSLVS
SVMYCILEPLAASINPLNDHWTLRDYGAMLLSHIFWAHGDLVGGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLSAYWSNLQAVLDDDSVSNAQVKADGHKVYG
AILVAVEKLLKMKAQSWSVPVEGSVAVRERSFPGLSPPQEPVSEPGFGIASHLLQGTAGV
PAEEPVPVQLPVMYRELYAFFGDSLAVRFSTGPGIKPRASRSAPSQPPDSKKEGVGPDTT
RKMPQLTSSLTISPRQDSSPKNEPGLPAAQNSSAAPSRFQRSSSSSSSLQRSKPPPSKAA
QRSAGPPREVFQKSRFPLPPVAAPFSFLIAGRQTGRRCQGRRFQTSFPQLHPPNPSAQPP
RGYAHKLPVIGRMGKPVKRWVCSQYSLHLPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagggaggagaggaagtttgcggaggtccagcgcgactctgtgaagctgatg
gcggagagtacgggggtggagctcagtgatgacatcgccgccatgctcgccgaggacgtg
tgttaccggctcagggaggcggcacagaacagctcccagttcatgaggcacgcgaagcga
cgcaagctgacagtggaggatttcaacagagccctgcgctggagcaacgtggaggctgtg
tgtgggtacggttctcaggatgcgctgcccttccggcctctcaaggagggtgagctgtac
ttcgtggaggatcgagagatcaacctggtggagctggctctggccaccaacatccccaag
ggctgtgcggagaccatggtgcgagttcaagtttcctatttggatgggaaagggaacgtg
gaaccccaaggcgcagtgcccacggcagtgcagtctctcacggacgacctcctcaagtat
taccagcaggtcaccagggccatactgggagaagaccagcagctcatgaaggttgcatta
caggatcttcagacaaactccaaaatcgcagctctgctcccttactttgtgcacgttgtc
agtggggtgaagtccgtgagccacgacctggagcagctgagccgcttgcttcacatggtg
aagagcctggtgcagaaccccttcctgtacctgggctcctacatcaagagcctggtctcc
agcgtcatgtactgcatcctggagccgctcgccgcctccatcaacccgctcaacgaccac
tggaccctgcgcgactacggcgccatgctgctcagccacatcttctgggctcacggggac
ctggtcggggggctgtatcaccagatcctgctctctcttcagaaggtgctgtcggaccct
gtgcggccgctctgctctcactacggggctgtggtggggctgcacgcgctgggctggaag
gcagtggagcgagtgctgtttcctcacctctcagcgtactggtctaacctgcaagcggtg
ctcgatgacgactctgtctccaacgctcaggtcaaagctgacgggcacaaagtctacgga
gccatcctggtggcggtagagaagctgctgaagatgaaggcgcagtcctggagtgtgcca
gtggagggcagtgtggctgtcagggagaggtccttccccgggctcagccctccccaggaa
ccggtctccgagcctggcttcggcattgcctcccacctgctgcagggcacggccggcgtg
cccgcggaggagccggtgccagtgcagctgcccgtcatgtaccgcgagctctacgccttc
ttcggggacagcctagccgtgcgcttcagcaccggtccaggcatcaaacccagagccagc
cgctcagccccctcccagccccctgacagcaagaaagagggggtggggcccgacaccacc
aggaagatgccccagctcacctccagcctgaccatcagcccccggcaggacagcagcccc
aaaaatgagcccggcctgccagctgcgcagaacagctctgctgccccctccaggttccag
cgctcgtcctcctcctcctcctctctccagagatccaagccacccccctccaaggctgct
cagcgctccgcagggcccccccgtgaggtcttccagaagagccgcttccccctgcccccg
gtcgcggcccccttctccttcctcatcgcgggcaggcagaccggccgccgctgccagggc
cggcgcttccagaccagcttcccccagctgcacccccccaacccctctgcacagcccccc
cgcgggtacgcacataagctgcccgtcatcggacgcatgggcaagcctgtcaagaggtgg
gtgtgctcccagtactccctgcacctgcctctgtga
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