Polyodon spathula (Mississippi paddlefish): 121306334
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Entry
121306334 CDS
T07273
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04068
FoxO signaling pathway
pspa04110
Cell cycle
pspa04218
Cellular senescence
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121306334 (tgfb5)
04350 TGF-beta signaling pathway
121306334 (tgfb5)
04068 FoxO signaling pathway
121306334 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121306334 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121306334 (tgfb5)
04218 Cellular senescence
121306334 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121306334 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121306334 (tgfb5)
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121306334 (tgfb5)
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121306334 (tgfb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
121306334
NCBI-ProteinID:
XP_041094021
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All DBs
Position
47:complement(2405733..2411475)
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AA seq
428 aa
AA seq
DB search
MVLMTVSARHTLAMPGPSLCLCACLLAALARSVPGLSTCQPGFDLDEFKSKRIEAVRGQI
LSKLRISRPPEAPAGPGQAPLEVMLLYNSTLELLQERARQAEGACERQDSEEDYYAKEVQ
KIDMLPARLDNAISTGLASPYFRVVNFAMSGMDRNSSTLVKAEFRVFRVPHPKARVAEQR
VELYQILKARDPAAPSQRYIDSRNVRPRSKGEWLSFDVTDTVREWLSHKGRNLGLKISVH
CPCCTFIPSNNNILPNRSEELECHFAGIDDDLIKQFEKSVKGGQSGSSSKTPHLILTLLP
TYRMESSQKKNRRKRAARETPVCSRTVDQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFC
AGTCPYLWSADTQYNTVLPLYNKMNPEASVAPCCVPQDLEALTIVYFTGRTPKVEQLSNM
VVKSCKCR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatgactgtatcagcgcggcacaccctggccatgcccggcccctccctgtgc
ttgtgcgcctgtctgttagcggcgctggcccgctccgttccgggcctctccacctgccag
cccgggttcgacctggacgagttcaagtccaagcggatcgaggcggttcggggccagatc
ctctccaagctcaggatctcgcggccgcccgaggccccggccggcccgggccaggcgccg
ctggaggtgatgctgctgtacaacagcacgctggagctgctgcaggagcgggcgcgccag
gccgagggcgcctgcgagcgccaggacagcgaggaggattactacgccaaggaggtgcag
aagatcgacatgctgccagcgagactcgacaatgccatctccaccggcctggcgagcccg
tatttccgggtggtgaatttcgccatgtccgggatggacaggaactccagcacgctggtg
aaagcggaattccgagtgtttcgggtcccgcatcccaaagcccgggtcgcggagcagagg
gtggagctctaccagatcctgaaggcccgtgacccggccgccccctcccagcgctacatc
gacagcaggaacgtgcgcccacgcagcaagggggagtggctctccttcgacgtcacagac
acggtgagagagtggctctctcacaaaggcaggaacctgggcttgaagatcagcgtacac
tgcccctgctgcaccttcatcccctccaacaacaacatcctgcccaacaggagcgaggaa
ctggagtgccacttcgcaggtattgacgatgacctcatcaagcagtttgagaagtctgtg
aaggggggccagtccggttccagcagtaagaccccccacctgatcctcaccctgctcccc
acgtacaggatggaatcctcgcagaagaagaaccgcaggaaacgcgcagcccgggagacg
cccgtgtgctccaggaccgtggatcagggctgctgcctgcgttctctctacattgatttc
cgaagagacctgaactggaagtggatccacgagcccaaaggatacaaagccaacttctgt
gcaggaacctgcccttacctgtggagcgcagacacacagtacaacacggtgctgcccctg
tacaacaagatgaaccccgaggcgtcggtcgcgccctgctgtgtaccccaggatctggag
gcgctgaccatcgtctacttcacgggcaggacccccaaagtggaacagctctccaacatg
gtcgtcaaatcctgcaagtgcagatag
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