Polyodon spathula (Mississippi paddlefish): 121306443
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Entry
121306443 CDS
T07273
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121306443
03012 Translation factors [BR:
pspa03012
]
121306443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121306443
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121306443
mRNA cycle factors
Stress granule specific factors
121306443
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121306443
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121306443
Exosomal proteins of bladder cancer cells
121306443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
AAA_22
UvrD-helicase
SpoIIE
Flavi_DEAD
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
121306443
NCBI-ProteinID:
XP_041094090
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All DBs
Position
48:110760..122272
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AA seq
406 aa
AA seq
DB search
MSAEFEDRTRDNGPEGMEPDGVIESNWNEIVDSFDEMNLRETLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQKVI
LALGDYMGAGCHACIGGTNVRNEVQKLQAEAPNIVVGTPGRVFDMLNRKYLSAKYIKMFV
LDEADEMLSRGFKDQIYEIFQKLSSNTQVVLLSATMPADVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
ALHGEMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatttgaggacagaactagagacaatggcccagaaggaatggagccagat
ggtgtcatcgagagtaactggaatgagatcgtggacagttttgacgagatgaatctgcgc
gagactctgctcagaggaatctacgcctatggtttcgagaagccttctgccatccagcag
cgggctattctcccttgtatcaaggggtacgatgtgattgcgcaggctcagtcaggcaca
gggaagactgccaccttcgccatctccatcctgcagcagattgacatcgagctgaagggg
acccaggccctggtgctggctcccacgcgagagcttgctcagcagatccagaaggtaatc
ctggctctgggcgactacatgggcgctggctgccatgcgtgtattggtgggaccaacgtg
cgcaacgaggtgcagaaattgcaggctgaggcccccaacatagttgtgggaaccccaggc
agggtgtttgacatgctgaaccgcaaatacctctctgcgaaatacataaagatgtttgtt
ctggacgaggctgatgagatgttgagccgaggcttcaaggaccagatctacgagattttc
cagaagctcagctccaacacacaggtggtgctgctgtcagctaccatgcctgcagatgtg
ctggaggtgaccaagaagttcatgcgggatcccattcgcatcctggtgaagaaagaagag
ctcactctggaggggatccggcagttctacatcaacgtggagaaggaggaatggaagctg
gacaccctgtgtgatctctatgagaccctgaccatcactcaggccgtcatcttcatcaac
accaggaggaaggtggactggctgacggagaagatgcacgccagagacttcacagtctcc
gccctgcatggggaaatggatcagaaagaacgagacctgattatgagggagtttcgctcc
gggtccagtcgcgttctcatcaccactgatctgctggcccgtggtatcgatgttcagcag
gtgtctctggtgatcaactatgacctgccaaccaaccgtgagaactacattcacaggatt
ggtcgaggcgggcgtttcggcaggaagggtgtggctatcaacatggtgactgaagacgac
aagcgcaccctgcgtgacatcgagaccttctacaacacgacagtggaggagatgcccatg
aacgtggctgacctcatctga
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