Polyodon spathula (Mississippi paddlefish): 121306474
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Entry
121306474 CDS
T07273
Name
(RefSeq) vesicle-associated membrane protein 2-like
KO
K13504
vesicle-associated membrane protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121306474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121306474
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121306474
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121306474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Orf78
PRIMA1
DUF1676
MCU
MgtE
Ferlin_C
CD34_antigen
Integrase_H2C2
Motif
Other DBs
NCBI-GeneID:
121306474
NCBI-ProteinID:
XP_041094128
LinkDB
All DBs
Position
48:complement(741548..755111)
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AA seq
160 aa
AA seq
DB search
MASDVSEPPVFCGERPAEPPYYSASEQRELITIGEQQREIFLFLGVGVVRSAPAAGEGGA
PAGPTPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQ
FETSAAKLKNKYWWKNMKMMIILGVICAIVLIIIIVYFST
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgacgtcagcgagccgcctgtgttctgtggggagagacccgccgagccgcca
tattacagtgcgagtgagcagcgagagctcattaccatcggagagcagcagcgcgagatt
tttctttttttgggcgtgggggttgtcaggtctgccccagcagcaggagaggggggagcc
cccgcgggacccaccccgcccccaaatctgaccagcaaccgcagactgcagcagacccaa
gcacaggtcgatgaggtggtggacatcatgcgtgtcaatgtggacaaggtcctggagagg
gaccagaagctatccgagctggacgaccgggcagacgcactgcaggccggagcctcccag
tttgaaaccagtgccgccaaactcaagaacaagtactggtggaagaatatgaagatgatg
attatcctgggagtgatatgtgcaatcgttctcatcattataattgtgtacttcagcacc
taa
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