Polyodon spathula (Mississippi paddlefish): 121306483
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Entry
121306483 CDS
T07273
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121306483
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121306483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121306483
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121306483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
SARA
FYVE
CENP-X
Motif
Other DBs
NCBI-GeneID:
121306483
NCBI-ProteinID:
XP_041094140
LinkDB
All DBs
Position
2:complement(105573852..105600685)
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AA seq
1534 aa
AA seq
DB search
MDSYFKAVVCDLDKLLDDFEQNTDELTASASYCAPAFPAPSLNSHHFVPESSPSQSLHEL
KSLTYSMSAEVSTSAAANGFQTKPLTELDLPTVDSRASKNIAPPCLDRGLKPVCDLVSNS
GSLIIGTNSHAAFQELDIVEKQLEEGLLVDFDLPSCAAGDALQFSLSNVPGVQVFSEGGL
GLHGAGRLATGYLESLSLLDIILPPEAADEPVNINSSSSTVCQEQLEVLQNEAVAQNVME
QNEEDGQEDQEFPCDPERTENGTTVLSKTECSEGSVAVNGTLDCTDAKELIHSKKNINGG
AKFNSSLEITACSSDKKLDCEEDVNSLNHVKSIREVEAEQNELNVPCSPTEDSETSLPCL
PIAMSMCGSLVLMQDSKSNRPQVETTKIIASELFPTQTNTLVVNSLSPDPETQRIIPPVE
ESTKTMDQIGPEPACESCRIQSETKVNPETKAFLHYTIPDSLAVAEADSVEGEDSSSSVV
DATEGWAYPVGSSPEFPSDITFVDDFLPDEDLCDNLVSDADLDAFLMEQSLKNTELRPME
NSTDEGFSEMNGDLSGLSDPSQNIGGDGLLEVVRSALNIKAVEPAYSEPERPPSLGVDQN
FVSSGDVALTVVEDAKGSGEANACSSVCQRPNPSACNNQHPYFGGARPKQLFVHPPKALL
TRELNDHKRGDFKDVPLAGEQTVNHVQSPGIGERFPNQSLASPGYTYSESIDSSVDLEEG
SESAQLIVNQEEDSTEEAASLDDRLMREESSLGLKQPAWVPDSKALKCMKCQLKFTFTKR
RHHCRACGKVFCGGCCNRKCKLKYMEKEARVCVICYETIHKAQALERMMSPTGPSPNPNI
PSEYCSTIPPLQQAQAAGTLNSPPPTVMVPVSVLKHPGNEAGLPREQKRVWFADGILPNG
EVADTSKLSVGVSKRSSQDSIPVTPEPPVPQVQKSLEKEIQDSTATALSYSSEQAPDIPK
AAMKVPNSPASRSPEDDMKHLITGPSDYRMLSTIGECITKTGSLVPDDEEGLPPVVIATG
ERGDDSLVEDRPSASQLILLLEEGGPNPLTFVLNVNLLVNVKLVTYAAQKCWCFSSNGLH
GVGQPEIMFLLQCLPEESTLPKDIFKLYITIYQDALKGKYVENLGNVTFSESFLGSKDHG
GFLFISPTFQPLNDLYLPDSPFLFGVLIHKLEVPWAKVFPLRLMLRLGAEYSVYPCTLTS
FRFRNPLFRETGHTIMNLLADLRNYQYSLASVEGLLIHMEMGNSYIEIPKGRFNEVMKVM
NSSNEHVISMGACFSMEADSHLVCVQNADGNYQTQANSVPGKTRRITGASFVVFNGALKA
SSGFIAKSSIVEDGLMVQITPETMEALRQAFREKRDFQIPCGKHDSGDLREYVNIHWVER
ASIVNTGIMSPVDGKSLEGVPSIKMQQEAEFESDGKLVKCTEVFYLLKRPEQSLASVLVA
HSQFPKEIATACCAALCPHLKTLKESGINKLGLRVSTDIDMVEYQAGSGGRLLPQNYMND
LDTALIPVIHGGSSSPPRSPMEMDFLFFITESLY
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggacagctacttcaaagcagtggtctgcgatctggacaaactactagatgattttgag
caaaacacagatgagcttacagcatctgcaagttattgtgctccagccttcccagctcct
tccctcaactcccaccactttgtccctgaatcatctccatctcaatctctccatgaactc
aaaagtcttacctacagcatgtccgctgaggtgtccacctctgcagcagccaatggtttt
caaacaaaacccttgacggaacttgaccttccaactgtcgacagcagagcttcaaagaac
attgcacctccttgtctggacaggggtctcaaacctgtctgtgacctggttagcaattca
ggatcacttattatcggaaccaatagccatgctgcttttcaggagctggatattgttgaa
aagcagttggaggaaggtttgcttgtagactttgatttgccttcttgtgctgcaggagat
gcattgcagttcagcctcagtaatgttcctggtgtacaggtgttttccgagggaggtttg
ggactgcacggagcaggtcgccttgcaacaggatatttggaaagcctgagcttattagac
attatcttgccccctgaggctgctgatgaaccagtgaatataaattcatcttcaagcact
gtctgccaagaacaattagaagtccttcaaaatgaagctgttgctcagaacgtcatggag
caaaatgaagaagacggccaggaggatcaagagtttccatgcgatccagagagaactgag
aacggcaccacagtcctttcaaaaactgaatgcagtgagggcagtgtggctgtaaacggg
acccttgattgcacagatgccaaggagctgatccactcaaagaaaaatattaatggtgga
gcaaagtttaactcctcattggaaataacagcttgttcatcagacaaaaagctagactgc
gaggaagacgtgaacagtttaaaccatgtaaaatccatcagggaggtggaagcagaacag
aacgaactaaacgtgccatgtagtcctacagaagatagcgagacgtccctgccctgtctt
ccaattgctatgtccatgtgcggctctttggttttgatgcaagactccaaaagcaacaga
cctcaggttgaaaccaccaagattatagccagtgaattgtttcctacccagactaataca
ctcgtggtgaacagtctttctcctgaccctgaaacacaaaggattattcctcctgtggag
gaaagtacaaagactatggaccaaattggtccagagcctgcctgcgaaagctgcagaatc
cagtcggaaaccaaagtcaaccctgagacaaaagcattcttgcactacacaatccctgac
agccttgccgtggcagaagcagattcagttgagggtgaagactcctccagcagtgttgtg
gacgccactgaagggtgggcctaccctgtgggctccagccctgagttcccttcggacata
acgtttgtcgatgactttctcccagacgaagacctgtgtgacaacctggtgagtgacgcg
gacctggatgccttcttgatggagcaaagcctcaagaacactgagttgaggcctatggag
aattctactgacgaagggttttcagaaatgaatggtgacctgtcagggttgtctgatcct
tcccagaacattgggggagatggcctgcttgaggttgtcaggagtgccctgaacattaag
gctgttgagcctgcatattcagaaccagagagacctccatctctgggggtagaccaaaac
tttgtttcttctggggacgttgccctgactgtagtagaagacgcaaaaggcagtggtgag
gcaaacgcgtgcagttctgtttgtcagagacccaacccaagtgcttgtaataaccaacac
ccatattttggaggggcaagaccaaaacaactttttgttcatcctccaaaagctctattg
acaagggaattgaatgaccataaaagaggcgattttaaagatgttcctttagcaggagag
caaaccgtaaatcatgtgcagtcccctggtattggagagcgcttcccgaaccagtcttta
gcaagtcctgggtatacctactctgagagtatagatagtagcgttgatttggaagagggc
tcggaatctgctcagcttatcgttaaccaggaggaggacagcacagaggaggctgcttcc
ctcgatgatcggctgatgagagaagaatcaagtctggggttgaaacagcctgcatgggta
cctgattctaaagcactaaagtgcatgaagtgccagctcaagtttaccttcaccaaaagg
aggcatcattgtcgggcatgtggaaaagtattttgtggtggttgctgtaaccgaaaatgt
aagctaaaatatatggaaaaagaagctagggtttgcgtcatctgctatgaaactattcat
aaagcacaagcccttgagaggatgatgagcccgaccggtccgagtcctaatcctaatatt
ccctctgaatactgctccaccatccctcccctgcagcaagcccaggcagctggcactctc
aactcccctccgcccacagtaatggtgcctgtgtctgtgctcaagcaccctggaaacgaa
gctgggcttcccagggaacagaaacgggtttggttcgcagatggtattttgccaaacgga
gaagtagcagatacatcgaaactgtcagtaggggtcagcaagaggtcgtcccaagactcc
atccctgtaacccccgaaccacctgtgcctcaggttcagaaaagcctggaaaaggagatt
caggattctacagctacagcgctcagctattcttcagaacaagcacctgatattcctaaa
gccgcgatgaaggtaccgaacagtccagcttctcggagtccagaagatgatatgaagcat
cttatcacagggccttcggattacagaatgttatccaccataggggagtgcattaccaag
acgggcagtctggttcctgatgacgaagaggggctgccccctgttgtcatagcaacaggg
gagagaggagacgactcgctggtggaggatcgcccctctgccagccagctgatactcctc
cttgaagaaggaggtcctaaccctctcacgttcgtgctgaatgtcaacctgctggtgaat
gtcaaactagtgacttatgctgcgcagaaatgctggtgcttcagctccaatggcctgcac
ggggtgggtcagcctgagattatgttcctgctgcagtgcctgccagaggaaagcactctc
cccaaagacatctttaagctgtacattaccatctatcaggatgcactaaagggcaagtat
gttgaaaatctgggcaacgtgacctttagtgagagtttccttggcagtaaggatcacggt
ggattcctgttcatttcgcccaccttccagcccttgaatgacctgtacctgccagacagc
cccttcctctttggggttctcattcacaagctggaggtgccctgggcaaaggtcttcccc
ctgaggctcatgctgagactgggagctgagtacagcgtgtatccttgcactttgacgagt
ttcagattccggaacccattattcagagaaactggacacactataatgaaccttctagca
gacctcagaaattaccagtacagtctggcgagtgtggagggcttgttgatccacatggaa
atgggcaacagttacattgaaatccctaaggggaggtttaatgaggtgatgaaagtaatg
aattcctccaatgagcatgtcatcagcatgggtgcctgctttagcatggaggcagattcc
cacctggtgtgtgttcagaacgccgatggaaactatcagacccaggccaacagtgtacca
ggcaagactaggagaatcactggagcaagttttgttgtattcaacggtgctctgaaggcc
tcctctggatttattgccaaatccagcatagttgaagatggtttgatggttcaaataaca
ccggagacgatggaagcattacggcaagcttttagggaaaaaagggacttccagatccca
tgtggaaaacatgattcaggagatttaagagaatatgtaaacatccactgggtggagagg
gcatccattgtaaacacagggattatgagtccagttgatggaaagtccttggaaggggtt
ccaagcattaaaatgcaacaggaggcagagtttgaaagcgatgggaagcttgtgaaatgt
actgaggtgttctatcttctgaagcgcccggagcagtctcttgccagcgttctggttgcc
cacagtcagttcccgaaagagatcgccacggcctgctgtgctgccctctgccctcacctg
aagaccttgaaagagagtgggataaataagctgggactcagagtttctacagacatagac
atggtggaataccaggcgggttcaggaggcaggcttcttcctcagaactacatgaatgac
ctggacaccgcgctcattcctgtgattcacggcggcagctccagccccccgcgcagcccc
atggagatggacttcctgttctttataacagaaagcctttactaa
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