Polyodon spathula (Mississippi paddlefish): 121306484
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Entry
121306484 CDS
T07273
Name
(RefSeq) calmodulin-binding transcription activator 2-like
KO
K21596
calmodulin-binding transcription activator
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121306484
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other transcription factors
Others
121306484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
TIG
Ank_2
Ank
Ank_3
AGRB_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
121306484
NCBI-ProteinID:
XP_041094138
LinkDB
All DBs
Position
48:1783464..1826576
Genome browser
AA seq
1705 aa
AA seq
DB search
MNNKEASTELSENNNHTKMFLPNKLLECVPKCTALPRERLRWNTNEEIASYLITFDKHEE
WLSCSLKTRPQNGSIIMYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGMECLYGCY
VHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPASEDCGKVCRPILSSSNSDRREWLKWSKE
ELISQLRPMFHGVKWTCGNGSSTAEFCIEQLVQQILESHQAKPQPRTHTCLCSGDLGTPG
NIPHKCNSTKHRIISPKVEEVRPYPSYPALTEVQNLSSGEPRPDSDQGGGEEGGGEKRKP
TPQQQHKPLPHREGGTALGTRTSPGLSSAGEGSPLSYSSSQSSFSSSSFAGSPDSAQNSP
ATGVLGNGHYGEQCVTGSLPQNAVIVMTTGLGGGRAGGMVDNNGVTPSQQLIAAAKTNAV
AAVSTSAPLSHSTTQLPPHPELGPPRAAPVILALIPGSVSGLLLSDTLDASMEVTDSSPA
TAVPAPTSVGTPPPAPAAFNPDSFLNSPRQGQTYGGAANQDSLSVSFCSPTSRRSPGVRS
LGEGERRGGGCSHPPTCSVTTATGTVQTPSANNNGGALVNSNGNGAAPSLSAIAQISPHC
AVADSTTPKTLSSPVCVSLFPSPSNPASPTSNPTYPSSLAAQTIPRMPLSRVSLGPSSLV
VVATAAIPPEQMGCLNGNRSVKSTQPPGNGNRFFIQDDDDAAATAGEIGVGGAHSARHRK
RSSPVDVKTRIQDCSSSAKEEMQKPALNFRAGCAEGETPMDTNADPGRPREREGDMGQLE
GHSPPPSSSSSSSSLSSCSASAGAGASEPDGNNSTVSDLYSIIQRSLGPATAQPSGAGTG
LCMEEEQFEISFDSQFPDLISEFISEDEERRVGEELPFCTSTPSPPPPPPPPASSCGTAV
LSSPLPHSQPFPILISSPPVCVATPALAGTAVPGLAPGGQYHRSLVTGTQLQQISSPHFL
PYPELAAGAPSPPAGGMEARQLVSITDFSPEWSYPEGGVKVLITGPWMEGSERYSCLFDQ
ITVPASLIQSGVLRCYCPAHEAGLVTLQVAQENHIISSSVLFEYRARNSKTLPSTQIDWL
SLDDNQFRMSILERLEQMEKRMAEMTASNQQQQAALREKTHLQAADSFEERIMAVCEKMM
ARPCWLRSERLLHETSFRGMTLLHLAAAQGYGRLIKTLIRWRSVNPESLDLEQEVDPLNV
DHFSCTPLMWACALGHLDAAVLLYQWDRLALSIPDSLGRLPLCVARSRGHVGLASCLEDL
ERQEQGLRAREEESGDWRQEPGQGPVWPDAEGGIGSSGSTVAEGGWPHWTGHPLEGARVS
SPLSTSPDTGKWSEFSSFPRESSSSSPDSDPSPTEQEVAMEISEPGRGFVQGKSLPTDSL
QDAGGDRGRREQPPPHLPAWYLQEEPASLQTRASMRDPLDAELLSYSENVENEECLPAGE
VLQVSLITLAEQIIKATPDRIKQEDFGSAETPLKERQDNTPVREGMPWLASYLENMEQLP
ALTQHSDLVFDKLDVPTTADWSEFLNASAGGRMESEFALLTLSDHEQRELYEAARIIQTA
FRKYKGRRLKEQQEMAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQ
KKFQQSRRAAVLIQQYYRSYKYERMKQGHRSGASMQQKMKGSFLTKKQDQAARKIMRFLR
RCRHRIKELKQSKELEGLQKRGLSS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaagaggcctccactgagctctccgaaaacaataaccacacaaagatgttt
ttgccgaacaaactcctggaatgtgtgccgaagtgcaccgcgcttcccagggagaggctg
aggtggaacacgaacgaggagattgcttcgtacttaatcacgtttgataagcatgaagag
tggctgtcttgctccctcaaaacaagaccccagaatggttcaatcatcatgtacaacaga
aagaaggtgaagtaccgcaaggacggttactgctggaagaagaggaaagacgggaagacg
accagagaggatcacatgaagctgaaagtgcagggcatggagtgtctctatggctgctac
gtccattcgtccatcgtcccaacattccacaggaggtgctactggctgctgcagaaccct
gacattgtgctggtgcactacctgaacgtgccggccagcgaggactgtggcaaagtctgc
agacccatcctctcctccagcaacagtgaccgcagggagtggctcaaatggtccaaagag
gaactcatctcccagctcagacccatgtttcacggcgtgaagtggacctgtggaaatggc
agcagcaccgcggagttctgcatcgagcagctggtgcagcagattctggagagtcaccaa
gcaaagccacagcccaggacccacacctgcctctgcagtggagacctgggaaccccaggt
aatattcctcacaagtgcaacagcaccaagcaccgcatcatctctcctaaagtggaggag
gtacggccctacccctcgtacccggccctgaccgaggtgcagaacctttcctcgggcgag
ccgaggccagactcggaccagggagggggcgaggagggaggaggggagaagaggaagcca
acacctcagcaacagcacaagcccctgcctcacagggagggggggacggcgctgggcacg
cggacgagtcccgggctcagcagtgctggggagggctctcccctctcttactcctccagt
cagtcctctttctcctcctcctccttcgccggcagccccgactctgcccagaactccccg
gcaactggtgtcctcggcaacggtcactacggggaacagtgcgtgactggcagcctacct
cagaacgcagtgatcgtcatgacgacggggctaggaggaggaagagcgggcggtatggtg
gacaataatggggtgacccccagtcagcagctgatagcggcagcaaagactaacgctgtg
gctgctgttagtaccagcgcccccctctcccattccactacccagctccccccgcacccc
gagctgggacccccgagagcagcccccgtcatcctagccctgatcccgggctccgtcagc
gggctgctgctttcggacaccctggacgccagcatggaagtcacggatagcagccccgct
accgctgttcctgcaccaacctccgtcgggacaccccctcccgcccctgctgccttcaac
cccgactccttcctcaacagccccaggcaggggcagacctacgggggcgccgccaaccag
gactccctctccgtcagcttctgctctccgacttccagacgctctccgggggtaaggagc
ctgggcgagggggagaggagagggggggggtgttctcacccccccacctgctccgtaacc
acggcaacagggaccgttcaaaccccctcagctaacaacaacgggggcgccctcgttaac
agtaacggtaacggcgcggccccctctctgtctgccatcgctcagatctccccgcactgt
gctgtagccgactccacaaccccgaaaaccctttccagcccggtctgcgtctccctcttc
ccttccccttccaatcctgcctccccaacttctaaccccacttacccaagcagcctggca
gcccaaacgatcccccgcatgcccctaagccgggtctctctggggcccagcagcctggtt
gtggtcgccaccgctgccatacctccggagcagatgggctgcctcaacggcaaccgaagt
gtcaagagcacccagccgccgggcaacgggaaccgctttttcatccaagacgacgatgac
gctgccgccaccgcgggggaaatcggggtcgggggagcgcattcagcacgacacaggaag
aggagttcccctgtcgacgtcaaaaccaggatccaggattgcagcagctcggccaaagag
gaaatgcagaaaccagctttgaatttccgagccggctgcgcagagggggagacgcccatg
gacaccaacgctgacccagggaggccgagggagcgggagggagacatggggcagctggaa
ggacactctcctcctccttcttcctcctcctcttcctcgtcattatcctcctgttctgcc
tctgccggtgctggagcttccgagccggacggaaacaactcgaccgtatcggatctttac
agcatcatacagaggagcctggggcccgcgaccgcccagcccagtggcgccggaaccgga
ctctgcatggaggaggagcagttcgagatctccttcgacagccagtttccggacctgatt
tcagaattcatctcggaggacgaagagaggcgcgtgggagaagagctgcccttctgcact
tccactccctctcctcctcctcctcctcctcctcctgcttcttcttgcggtaccgcagtc
ctctccagccccctaccccactcgcagccttttcccattttgatatcgtcgcccccagtc
tgcgtagccacccccgctctcgctggcaccgcagttcccggactggcccccggggggcag
tatcaccggagtctagtcaccggcacgcagctgcagcagatctcctcgccccacttcctc
ccctaccccgagctggccgccggggctccgtcgccccctgctggagggatggaagcaagg
cagctggtgtccatcacagatttttctccagaatggtcttacccagagggcggggtgaag
gtgctgatcaccgggccctggatggaggggagcgagcggtactcctgcctcttcgaccag
atcaccgtcccagcctcgctcatccagtctggggtgctgcgctgctactgccctgctcac
gaggctgggctggtgactctgcaggtagcccaggagaaccacatcatctcctcctcggtg
ctgtttgagtacagagcacgcaactccaaaacactgccgagcacccagatagactggctg
tctctggacgataatcagttcaggatgtcgattctggagcgactcgagcagatggagaag
agaatggctgagatgacagcatctaatcagcagcagcaagcagcactcagggagaaaacg
cacctccaggcggcagactccttcgaggagcgcatcatggcggtgtgtgagaagatgatg
gcccggccctgctggctgcgttcagagaggctgcttcacgagaccagcttcagagggatg
actctgctgcacctggcggccgcgcagggctacgggaggctgatcaagaccctcatccgc
tggaggagcgtgaatccggagagtctggatttagagcaggaagtggaccccctgaatgta
gatcacttctcctgcacaccgctgatgtgggcctgtgcgctgggtcacctggatgccgcg
gtgctcctgtaccagtgggaccggctggccctctctatcccggactcgctgggcaggctg
cccctgtgcgtggctcgatccagggggcacgttgggctggccagctgcctggaggatctg
gagaggcaggagcaggggctgagggccagggaggaggagtcaggagactggaggcaagag
ccaggacaggggccggtgtggcccgacgcggagggaggcattgggagttctgggagcact
gttgcggagggaggctggccgcactggactgggcaccccctcgaaggggcaagggtttcc
tccccactctccaccagccccgatacaggtaagtggtcagagttcagctctttccccagg
gagtcctcctcgagcagccccgactccgaccccagccccacggagcaggaggtggccatg
gagatctcagagccggggagggggttcgtgcaagggaagagcctgcccacagactccctg
caggatgctgggggggaccgggggaggagggaacagcctccaccgcacctccctgcgtgg
tacctccaggaagagccggcctctctccagaccagggcctcgatgcgagaccccctggat
gcggagctgttgagctacagcgagaacgtggagaacgaggagtgcctgcccgccggcgaa
gtgctgcaggtgagcctgatcaccctggcagagcagatcataaaagccactccagaccgg
atcaagcaggaagacttcggctcagcggagacgcccctgaaggagcgccaggacaacacc
cctgtcagagagggcatgccctggctggccagctacctggagaacatggagcagctgcca
gcactgacccagcacagcgacctggtctttgacaagctggacgtccccaccactgccgac
tggtctgagttcctgaacgcctcggctggtgggagaatggagagcgagtttgcgctactg
acgctgtctgatcacgagcagagagagctgtatgaggcagcacggatcatccagacagcc
tttcgcaagtacaagggtcgaaggttaaaagagcaacaggaaatggctgcagctgtgatc
cagaggtgctacaggaagtacaagcagctaacatggatagctctgaagtacgccctctac
aagaagatgactcaggcagccatcttgatccagagcaagttccgcagctactacgagcag
aagaagttccagcagagccggcgggcagcggttctgatccagcagtactatcgcagctac
aagtacgagagaatgaagcagggccaccggtccggggccagcatgcagcagaagatgaag
ggatcctttctgacgaagaagcaggaccaggcggctcggaagatcatgcgattcctgaga
cgctgccggcacaggataaaggaattgaagcagagcaaggagttggagggcttgcagaag
aggggtctgagcagctag
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integrated database retrieval system
