Polyodon spathula (Mississippi paddlefish): 121306521
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Entry
121306521 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 38-like
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121306521
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121306521
04121 Ubiquitin system [BR:
pspa04121
]
121306521
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121306521
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121306521
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121306521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-C2HC_2
zf-H2C2_2
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121306521
NCBI-ProteinID:
XP_041094204
LinkDB
All DBs
Position
48:1536760..1547741
Genome browser
AA seq
1795 aa
AA seq
DB search
MVSVAEALDSGHPSALLSRLNNQRTCGGLFCDITLIAGESKFRAHQNILSACSLYFKQLL
SSSPPLHAPLQSERVLELPELKADIFADVLDYIYTSRVYLRSFKRTKELAKAGKRLGIPF
LENIVKEQQRGKPIKTGIKAASVTTTTAQPSDLPCNFAPRFLGGNEQQVSSYNGPEDSAN
SGWRMAASASEQTQQQLNPRAVLQSLSPVDLTASARKDSESHQPSSPIPQFQSVSHLLPP
QGTVPTFSATSLQPLPPETTNTTPRTARDTGLSPAAESYAENFDSERSTTETAKILFTLS
TAAFKGMGNNSETAVRKAADDPAPEDGFGGANSTAEGLLPPPPPLPEHLGPARPSAKGFL
CRVCKRSFSSPSSLSTHLKLHRADRALSCRHCGRAFIHNKRLQSHEAVCREAPQKGPPAP
LAAVRPKKLLQSCELEGEGEEETGEEKGEEEEDEEEEEEEEEEEGNPESEPSEKSSTKKK
GRGIPVRHRNFQRMDLLAEEDHFVKVVDGHIIYFCTVCERSYMTLSSLKRHSNVHSWRRK
YPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWEAFVTYYNLKTHQKSFHGINPGLIS
SEKTANGGYKQKLNALKLYRLLPMRSQKRAYKTYSQALSESILMPSLTAPLDNGLPESPG
SEGLCSLGLHPGGAGDYIFPASLDPATLEQGEIPTGPHNLSSPAMHGIREGEMDEEAAKS
LPESRTGFPSADGSVSTVIAYGHPKPSVIVHGTAVSSVIVHSNQVASTSVNSSSSSSSSS
SYPSRRPSSEPSKVPPPIKKQVLKEYIQSQKRASSEETEEEEGRRSVGEDKKSPKPCRSS
ANSNSVTYVAKPAYVGASSETRGGAPLCQITVRIGEEAIVKRSISETDLMRDKGSPANKT
KRMDPLHKETNQHQYQQQHQHHNKETDQHQHQHLHHNKDAKKKKKCKVNKLREYNFRREV
REEESDQDAEDNLWRPYYTYKPKKKTLHVQKVKKSSWRRKLRYKRSLRLMKRAEKLLGRS
LDEGGDCKPSAGLQDERGVAKEEEEEEEQENFSCHICEETFLDFHSLEKHERNHRTGKAF
ECTTCGRQFSTVKKLDKHELTHLMEFVCLRCQESFRNRALMEAHQKMHHAKSENCFPQER
EFVTESKETGYPEKSNLPRVGRRPSVRHTCTSCSKVCKTVAALGRHMKRHEAEREGSAEP
GPELYSAAEAESEAADLDHDLEANRDQVKSIPVINYTTSAADETSDGLADVSRYSPQYDN
PGKTQIESDQAMLAQLSEVSSNNEQEVLENPGSSPRGSKIVPPSGSPEAAPPARAEVPSS
SVQTVLVLNGRDCLDSCQQQEAVTPYRAIRSPVGQPQGPLLMTTEHREPGPRSQSYKHQD
ECTGSATPRPNATAEGTARSDEGSNAQNNYEQDTGPYSYQSTPLMSHAGKEDDDGPQNLV
MSQAGPSPPPPPPPPLEASERCEMESRGQGEPPVRAMLPHAGIEAPLSAQELMMSHLARD
TLPAPDLLRTHMGRAAAPQELMTSRNGRSEGLMMMRVPQKGETLPATEFTTTQTTAGTAN
TASAAAAAHGRLMPQTTTSNKCPYKRIKSPNLGTNTLAQELLKPHLGPNATIQDVARMAH
EGLIPQNLMMPRGTGESMRAKNPLAPRQSEELEDSAPQDLRMVTTFPVQEFPLPLLAPAS
CRSSKKHQESPRLSYPPTAMQFGDLGKMSSGDLAKLPFYPDPYQLLYGPQLLAYPYNLAA
LPMALNMVVPNEKGQPLPLLPTLFSYVNPCTGLVQEPHLLAKSSRRADHRDAANQ
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgtggcagaggccttggactctggccaccccagcgccctcctctcgcgcctg
aacaaccagcgcacatgtggcggactgttctgtgacatcacactcatcgcgggggaatcc
aagttcagggctcaccagaacatcctgtctgcctgcagcctgtacttcaaacagctgctc
tcctcctctcctcctcttcacgcccccctccagagcgagcgagtccttgagttgccggag
ctgaaggcggatatttttgcggatgtcttggattacatatacacctccagggtctacctc
cgcagtttcaagcgtaccaaggagcttgccaaagccgggaagaggctggggatcccgttc
ctggagaacatagtgaaggaacaacagagaggcaaacccatcaagacaggcatcaaagca
gccagcgtgacgaccacaacagctcagccctcggacctcccctgcaactttgcgccaagg
tttctcgggggaaacgagcagcaagtgtcttcctacaacgggccggaggactccgcgaac
tcggggtggaggatggcggcctcagcatcagagcagacgcagcagcaactcaaccccagg
gccgtgcttcaatctctgtctcccgtggacctgacggcctcagccagaaaggactcagag
tcgcaccagccttcctctcccattcctcagttccaaagtgtttcacatttacttcccccc
cagggcactgtaccgactttttccgccactagccttcagcccttgcctccagagacaacc
aacaccactcccaggacagcgagagacacgggactcagccccgcagccgagagctacgct
gaaaacttcgactccgaacggtctaccacggaaacggccaagatactgttcactctgagc
acggccgcattcaaaggaatgggtaacaacagcgaaacggccgtccgaaaagctgccgat
gaccccgcgcccgaagacggattcggtggtgcaaattcaacagcagaagggctgctgccg
ccgccgccgccgctacctgagcatctcggcccagcccgtccttccgcgaaggggttcctc
tgcagggtgtgtaagcgctccttcagctccccctcttccctgagcactcacctgaaactg
cacagggccgaccgggcgctctcctgcaggcactgcggcagagcgttcatccacaacaag
aggctgcagtcccacgaggccgtctgcagagaggcgccacagaagggaccgccggctcca
ctggcggcggtcagacccaagaagctcctccaaagctgcgagctggagggagaaggggag
gaggaaactggggaagagaagggggaagaggaggaggatgaggaggaggaggaggaggag
gaggaagaggaggggaatcctgagtcagaaccttcagaaaagtcttccaccaaaaagaaa
ggacgcggtattccggtacgccaccggaacttccagaggatggacctgcttgcggaggaa
gaccacttcgtgaaagtggtggacggccacattatctacttctgcacggtctgcgagcgc
tcctacatgaccctgtcaagcctcaagcgacactccaacgtacactcctggcgcaggaag
tacccgtgtcgttactgcgagaaggtgttcgccctggcggagtaccggaccaagcacgag
gtgtggcataccggggagaggcgctaccagtgcatcttctgctgggaggccttcgtcact
tactacaacctcaagacgcaccagaagtctttccacggcatcaaccctggcctgatcagc
agcgagaagacggccaacggtgggtacaagcagaaactaaatgccctcaaactctaccgc
ttgttgcccatgagatcccagaaaagggcttacaaaacatacagccaggccctttctgaa
agcatcctaatgccttccctgacagcgcctttggacaatggccttcctgagtctccgggt
tctgaggggttatgctctctgggtcttcacccggggggtgctggggattatatatttccg
gcatcgttggaccctgctactttggaacaaggggaaatacccaccggtccacataacctg
tctagtcctgctatgcatgggataagggagggcgagatggacgaggaagcagcaaaaagc
ctgccggaaagcagaacaggttttccaagcgcagacggttctgtctccacggttattgcg
tacggtcaccccaagccctctgtgatcgtgcacggcacagctgtctcctccgttatcgtg
cacagcaaccaggttgcatcgacgtccgtgaacagcagcagcagcagcagcagcagcagc
agctatccgagtcgtcgcccctcatccgaaccctcaaaagtccccccacccatcaagaaa
caggtcctgaaggaatacatccagtcccagaaaagagcttccagtgaggaaacagaagaa
gaagaagggaggagaagcgtaggggaagacaaaaaatcaccgaaaccttgcaggagctct
gccaacagcaacagcgtcacctacgtggccaagccagcgtacgtgggagcgtcttcagag
accagaggcggtgcccccttgtgccagatcactgtgcgcatcggggaggaagccatcgtg
aagaggagcatctctgaaacggacctgatgagggacaagggttcccctgccaacaagacc
aaaagaatggaccctctccacaaggagacgaaccagcaccagtaccagcagcaacaccaa
caccacaacaaggagacggaccagcatcaacatcaacacctacaccacaacaaggatgcc
aagaagaagaagaagtgtaaagtgaacaaactgagggaatacaatttccgcagggaggtg
agggaggaggagagcgaccaggacgctgaggacaacctatggcggccttactacacctac
aagcccaagaagaagaccctgcacgttcagaaagtaaaaaaatccagctggaggcggaaa
ctccgatacaagcgctcactgcggctgatgaagagggcggagaagctcttgggccgaagc
ttagacgagggcggcgactgcaagccaagcgccggtcttcaggatgagcgaggagtggcc
aaggaggaggaggaggaggaggagcaggagaatttcagctgccacatttgtgaagaaacc
ttcctggatttccactctctggagaaacacgagaggaaccatcggacgggcaaggccttc
gaatgtaccacctgcggcaggcaattttccactgtgaaaaaactagataagcatgagctg
acccacctgatggagttcgtatgcttgcggtgtcaggagtccttcaggaacagggcgctc
atggaggcgcatcagaagatgcaccacgctaaaagtgagaactgtttcccccaagagcgg
gagttcgtgaccgaatccaaagaaacgggctacccagagaaaagtaacctgccccgggta
gggagaaggccgtctgtccggcacacctgcacctcctgttccaaagtctgcaagactgta
gcagcactggggaggcacatgaaaaggcacgaggcagagagagaaggttcagcagagcct
ggaccagaactgtattccgcagcggaagcagaatcagaagcagcagacttagatcacgat
ttagaagcaaacagagatcaggttaaatctatccctgttattaattacaccacatcagca
gcagatgagacaagcgacggcctggccgacgtgagcagatactcacctcaatatgacaac
ccgggcaaaactcagattgagtctgaccaggcaatgctggcacagctgtctgaagtatct
tccaataatgaacaagaagtccttgaaaatcctggctcaagtccaaggggaagcaagatt
gttcccccgtctgggagcccggaagctgcacctccagccagggctgaggttcccagcagt
tcggtccagactgttctggttctgaacggcagagactgtttggactcttgtcagcagcag
gaggctgtgacgccttacagggccataagaagcccggtggggcagcctcaggggccactg
ctgatgaccacagaacaccgcgagccaggaccacgttctcagagttataaacatcaagat
gagtgtacgggcagtgctacaccaagacccaacgcaactgccgagggaacagcgagatca
gatgaaggaagcaatgctcagaacaattacgaacaggacactggcccatacagttatcaa
agcactccgctgatgtcacacgcaggaaaggaggacgatgatggtccccagaacctggtg
atgtcacaagcgggacccagccctcctcctcctcctcctcctcctctggaggcttccgaa
cggtgcgaaatggaatcgcgcgggcagggagagcctcctgtgcgggcgatgttgccgcac
gcaggaattgaggcccctctgtctgcacaggaactaatgatgtcccacctagctagagac
actcttcctgcaccagatctgctgagaacgcacatgggaagggctgcggctccacaagaa
ctgatgacgtcacgtaacgggagatcggaggggctgatgatgatgagggtgcctcagaaa
ggggaaacgctcccggcaacggaattcactacgactcaaaccactgcaggcactgctaac
actgcctctgctgctgctgctgcacatggacgtctcatgccacagaccaccacttccaac
aagtgcccctacaaaaggatcaaatcgccaaacctgggtacaaacactctggcgcaagaa
ctgctgaagcctcacttggggcctaacgcgaccatccaggacgtggcgaggatggcgcac
gaaggcctgattccgcagaacctgatgatgccccgcggaaccggagagagcatgcgcgcc
aagaacccactcgctccccgccagtctgaagagctcgaagactctgctccgcaggatctc
cgcatggtgacgactttcccggttcaggagttccctctgcctctcctggcacccgccagc
tgccgatccagcaaaaaacaccaggaaagcccccggctctcctacccgcccactgccatg
cagtttggcgacctgggcaagatgtctagcggtgatctcgcaaagctgcctttttacccg
gacccctaccaactgctctacgggccccagctcctggcgtacccttacaacctggcggct
ctgcccatggctttgaacatggtggtccccaatgaaaaagggcagcctcttccactcctg
ccaaccctcttcagctatgtgaacccctgtacggggcttgtgcaggagccccacctgtta
gctaaatcgagtaggagggccgaccaccgcgacgccgcgaatcagtag
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integrated database retrieval system
