Polyodon spathula (Mississippi paddlefish): 121306543
Help
Entry
121306543 CDS
T07273
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121306543 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121306543 (taf6)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306543 (taf6)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121306543 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
121306543 (taf6)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121306543 (taf6)
STAGA complex
121306543 (taf6)
TFTC complex
121306543 (taf6)
SAGA complex
121306543 (taf6)
SLIK complex
121306543 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
121306543
NCBI-ProteinID:
XP_041094256
LinkDB
All DBs
Position
48:complement(172849..181940)
Genome browser
AA seq
636 aa
AA seq
DB search
MAEERRSKLSNTLLPTESMKAIAESIGVSQMQEETCQVLSEEVSYRIKEILQDSLKFMHH
GKRRKLMTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVSMKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGQLQG
KDKKKLLEGSAMKLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQ
MLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVS
RQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKTQWTTRY
GCIAGLAELGHDVIKTLIIPRLQVEGSRIKAVNEGPIIGNIDKIGADHVQSLLLKHCAPV
IAKVRCPPDNQEQYRVEYGYLGPMLCTHVVKARAQAAMQAQQVNRTTLTITQPRPTLTLS
QGAQSSRTPSIIKVPSSITLPMQTLVSARPSTPTQPSPPPTKFIVMSSSTGSTTTQQVIT
LSSAQSSVTSTSPVTSTVPSLQPLVKLEGGHTQGAGPLSGGGGASRTMQKYIVVSLPPAG
DNKTLTPSLESNSATSVKLERDDSPATGNQSPQPSH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaggcgctcgaagctcagtaacacgctgctccccacggagtcgatgaag
gccatcgcagagtccatcggggtctctcagatgcaggaggagacgtgccaggtgctgagt
gaggaggtcagctaccggatcaaggagatcttacaggactctttgaagttcatgcatcat
ggtaagaggcgcaagctgatgacaagtgacatcgactacgctctcaaactgaagaacgtc
gagcccctctatggtttccatgctcaggagttcatccctttccgtttcgccagcgggggc
ggtagagagctgtacttctacgaggagaaggaggtggacctgagtgacatcatcaacacg
ccccttcccagggttccgctcgacgtgtccatgaaagcccattggttaagcatcgaagga
gtgcagccagccattccagagaacccgcccccagccccgaaggagcagcagaaggccgag
tccactgagccgctgaaggctgtgaaacccggacaggaagaggaggggcagctgcaaggt
aaagacaagaagaagctgctggaaggctctgctatgaagctgaagccacgcagcacccac
gagctgtcagtggagcagcagctttattacaaagagatcactgaggcatgcgtgggctcc
tgtgaggcaaagagagccgaggcactgcagagtatcgctacagaccctgggctctaccag
atgctacccagattcagcaccttcatatcggagggagtgcgtgtgaacgtcgtgcagaat
aacctggctctgctcatatatctcatgcggatggtgaaagccctgatggacaatcccact
ctctacctggagaaatacctccacgagctcatcccagcagtggttacctgtatagtgagt
cgacagctgtgcctgcgccccgacgtggataatcactgggctctccgggacttcgccgcg
cggctcatggctcagagctgcaagacgttcagcaccacgaccaacaacatccagtcgagg
atcaccaagacattcaccaagagctggctggatgagaagactcagtggacaactcgttac
ggctgcatcgctgggctggctgagttggggcatgatgttattaagaccctgattatcccg
aggctgcaggtggagggctctcggatcaaagctgtaaatgaggggccgatcatcggcaac
attgacaagatcggagccgaccatgtgcagagcctgctgctgaagcactgtgccccggtc
atcgctaaggtgcgctgcccccctgataaccaggagcagtaccgggtggagtacggctac
ctgggtcccatgctgtgcacacacgtggtgaaggcaagagcacaggcagccatgcaggca
cagcaagtgaacaggaccacactcaccatcacacagcccagacccactctgacgctgtct
cagggggctcagtcttccaggacccccagtatcatcaaggttcccagttccatcacgctg
cccatgcagacactggtctccgcgcgaccttcaacccccacccagccctcgccgccgccc
acaaagttcattgtgatgtcatcgagcacgggcagcaccacaacacagcaggtgatcact
ttaagctctgctcagtcctcggtcaccagtacgtctccagtcacctccacagttcccagt
ctgcagccgctggtgaagctggagggagggcacacacagggggcggggcctctgtcagga
gggggcggggcctcacgcacaatgcagaagtacattgttgtgtcacttcctcccgctgga
gacaacaaaacactgaccccctccctggagtcaaacagtgcgaccagtgtcaaactggag
agagacgacagccctgctactgggaaccagtccccccagccttcccactga
DBGET
integrated database retrieval system
