Polyodon spathula (Mississippi paddlefish): 121306547
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Entry
121306547 CDS
T07273
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121306547 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121306547 (chrne)
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121306547 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121306547
NCBI-ProteinID:
XP_041094262
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Position
48:complement(346355..351612)
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AA seq
516 aa
AA seq
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MKNLAGLFSLIFWCTAQLHALPSRNQELKLIQDLLKGYSKNTRPAQGPDDVVGVQLKLIL
TNLISLNEKEETLTTNVWLEIQWSDSRLSWNESEHEGISVIRIPHNLVWLPDIVLENNVD
GKFDVAYYAKVLVSPDGSMYWLPPAIYRSACSVEVTYFPFDWQNCTLLFRSQTYSGSEID
IQLAVDGDTGKTIEWVDIDPEAFTENGEWAIKHRPAKVVINPRYTPNDLEYQEVHFNLII
QRKPLFYIINIIVPCVLISSLAVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIGQKVPE
TSLSVPLIGKYLIFVMFVTTLIVTNCVIVLNISLRSPSTHNMSRTIRHVFLEILPPYLRM
TIPSSSEDQSEPPQPVRRRSSFGIMMKAEEYILKQPRSELVFERQRSQHGLTRNHCVDGI
DVGATAHLYRSLAHLAPEIKECVDACNYIAESTNTQNNIGEARESWVLIGKVIDKVCFWA
AILLFSFGTIGIFLMGHFNQVPEYPFPGETKKYLPE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttagccgggctgttttccttgatattctggtgcaccgctcaattacacgcg
cttcccagtcgtaatcaggagctgaagttaattcaggacctgctgaaggggtacagcaag
aacacacggccggcgcaggggccagatgatgtggtgggggtgcagcttaaactgatactg
accaacctgatctcactgaatgaaaaagaggagactctgacgaccaacgtgtggctcgag
attcaatggagtgactctcgcctgtcatggaacgagtcggagcacgaaggtatttccgtg
atcagaatcccccataatttggtgtggcttccggacatcgtgctggagaacaatgtggat
ggcaagttcgatgtggcgtactatgccaaggtgctggtctcccctgatggcagcatgtac
tggctcccccccgccatctaccgcagcgcctgctctgtcgaggtcacctacttccccttc
gactggcagaactgcaccctgctgttcaggtctcagacctacagcggcagtgagattgac
attcagctggctgtggacggagacacggggaagacaatcgagtgggtggacattgaccct
gaggccttcacagagaacggcgagtgggcgatcaagcaccgccctgcgaaggtcgtgatt
aaccctcgctacacccccaatgatcttgagtaccaggaggttcacttcaacctcatcatc
cagaggaaacccctgttctacatcattaacatcatcgtgccctgtgtactcatctcctca
ctcgctgtgctggcgtacttcctgccagcccaggccgggggtcagaagctgaccgtgtca
atctcggttctgctcgctcagactgtgttcctcttcctgatcgggcagaaggttccggaa
acatccctgtctgtcccgctgatcggaaagtatctgatcttcgtcatgtttgtgacgact
ctcatcgtgacgaactgcgtgatcgtgctgaacatctcgctgcgcagcccgagcacgcac
aacatgtcccgcaccatccgacacgtgtttctggagatcctgcctccctacctgaggatg
accatcccctcctcctccgaggaccaatcagagcccccgcagcctgtgaggaggcggagc
tccttcggcatcatgatgaaggcagaggaatacatcctgaagcagccgcgcagcgagctc
gtgttcgagaggcagaggagccagcacgggctcacccggaaccactgcgtggacggtatc
gacgtgggcgcgactgctcacctgtacaggagcctggctcacctggcccccgagattaag
gagtgtgtcgatgcctgcaactacatcgcagagagcaccaacacacaaaacaacatcgga
gaggcgagggagagctgggtgttgattgggaaggtgattgataaggtctgcttctgggct
gccatcctgctgttctccttcgggaccatcgggatattcctcatgggacacttcaaccag
gttccggaataccctttcccaggggagacgaagaaatacctgcccgagtaa
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