Polyodon spathula (Mississippi paddlefish): 121306548
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Entry
121306548 CDS
T07273
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121306548 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121306548 (chrnb1)
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121306548 (chrnb1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121306548
NCBI-ProteinID:
XP_041094263
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Position
48:complement(907416..919969)
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AA seq
490 aa
AA seq
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MQALGISLVVSCLWILADASEAENNLTTKLYKDYNLKVRPAKEQGDRVMVRVGMTLASLV
SVTEKNEEVTTNVFMNLAWTDYRLSWNPAEHDNIQVLRIPSARVWRPDIYLINNNDGIFD
VALHVHVQVYSDGTVTWTPPAIYRSTCGIKVTFFPFDWQNCTMVFRSYTYDASELDLQHA
LDKKGNEVREVTIDSSFSENGEWLIRHMPSSKNVGDDLYEDITFYLIIERKPLFYIFNII
IPCLLITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIVNYLM
FTMILVTFSVILSVVVLNLHHRSSSTHDMPLWVRKIFIHLLPRYLGLLRPKKEPPLKLNL
PPQRETLGCVNRAVDEYFIRKPNCNFLLSKQNRYQNESQTSDMRRFIDGPSQYLTLPPDL
KSAVDAITYIAEQLQAEQDDGALTEDWQYVAMVVDRLFLWIFVIFTTVGTLAIFMDASFN
GTPLDPFPSP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcactggggattagtcttgtggtgtcctgcctttggatcttggctgacgcctcc
gaggcagagaacaacctgacgaccaaactgtacaaggactacaacctgaaggttcgcccg
gcgaaggagcagggggacagggtgatggtgagggtgggcatgaccctggcctcactcgtc
agcgtgactgagaagaatgaagaagtgactaccaatgtgttcatgaatctggcctggaca
gattaccggttgagttggaacccagcggaacacgacaacatccaggttctgagaattcct
tcagccagggtgtggcgcccagatatctatctcattaacaataatgatggcatttttgat
gtggctcttcatgttcatgtacaagtctacagtgacggcacggtcacctggaccccccct
gccatctatcgcagcacctgtggcatcaaggtgaccttcttccctttcgactggcagaac
tgcaccatggtgttccgctcatacacctatgatgcctccgagctcgatctgcagcacgcg
cttgataagaagggcaacgaggtcagggaagtcactatcgacagcagcttcagcgagaac
ggggagtggctgatccgccacatgccctcgtcgaagaacgtgggagacgacttgtacgaa
gacatcaccttctacctgatcatcgagcgcaagcctctcttctacatcttcaacatcatc
atcccctgcctcctcatcaccatcattgccatattcaacttctacctccctcctgacgca
ggtgagaagatgggtctgtccatcaacgtgctgctaaccctcactgtgttcctgctgctg
ttagcagacaaggttcctgagacctccctaggagtgcccatcatagtcaactacctgatg
ttcaccatgattctggtcaccttctctgtgatcctgagtgtggtggtgctgaacctgcac
caccgctcctccagcacgcacgacatgcctctctgggtgcgcaagatattcattcacctg
ctacctcggtacctgggcctgctgaggcccaagaaagagccacctctgaagctgaacctg
cccccccagagagagactcttgggtgtgtgaacagagctgtggacgagtacttcatccgc
aaacccaactgcaacttcctgctctccaaacagaaccgttaccagaatgagagccagacc
tcagacatgcggcgcttcattgacgggcccagtcagtacctcactctgcctccagatctc
aagtcggctgtggacgcgatcacttacatagcagagcagctccaggcagagcaggacgat
ggagcgttgacagaggactggcagtatgtagcaatggtagtggaccggctctttctctgg
atctttgttatcttcactactgtgggcacacttgccatattcatggatgccagcttcaac
gggacccccctcgacccattccccagcccctag
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