Polyodon spathula (Mississippi paddlefish): 121306553
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Entry
121306553 CDS
T07273
Name
(RefSeq) macrosialin-like isoform X1
KO
K06501
CD68 antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121306553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121306553
CD molecules [BR:
pspa04090
]
Proteins
121306553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Adeno_E3_CR2
NEMP
DUF6165
Syndecan
Motif
Other DBs
NCBI-GeneID:
121306553
NCBI-ProteinID:
XP_041094273
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All DBs
Position
48:775349..783726
Genome browser
AA seq
357 aa
AA seq
DB search
MKTTGTIFLFVALAAVVTLCASEEEKRDCPHHKTAATLSPAKEFTSPALSTTIPVTNHTT
PMTNLTTAVPITNHTTPPITNHTTSMINHTTHAPITNHTTPMINHTTPMINHTTHAPITN
HTTPMINHTTPMINHTTHAPITNHTTATTPAPRPTPPVPLAVGDYNVKAGDVVCVRARLA
IQLKIQYDIAGGKQLWGVFFVQPNLTTASGTCQGKQATLKLNFKEGSIVFSFQKDNDSVS
VKSIKSEVNYPFTNMESHFSASNDSLSEFRARIGHSYSCKNQSVMINAGFYLETSQQQVQ
AFNITKGDFGPADFCPADQPNYTVAIAVGVVLAILIVIVIIAYLISRRQHPAGYQTL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagactacaggaaccatatttctctttgttgcactggcagctgttgtgactctctgt
gcatctgaggaagaaaaacgcgattgtccacatcataaaacagcagccacgttatcacca
gctaaagaatttaccagtcctgctctaagcaccactataccagtaaccaatcacacaacc
ccgatgaccaaccttacaactgctgtaccaatcaccaaccacacaacaccaccaatcacc
aaccacacaacctcgatgatcaatcataccacccatgcaccaatcaccaatcacacaacc
ccaatgatcaatcacacaaccccaatgatcaatcataccacccatgcaccaatcaccaat
cacacaaccccaatgatcaatcacacaaccccaatgatcaatcataccacccatgcacca
atcaccaatcacaccacagctactacgcccgccccaaggccgacaccccctgtacccctg
gcagtgggcgattacaatgtgaaagcaggggatgttgtgtgtgtccgagctaggctggcg
atacagttgaaaattcaatacgacattgctggaggaaaacagttgtggggcgtgtttttt
gtccagcctaacctaactacagcttcaggaacttgtcaaggtaaacaagccacacttaag
ctgaacttcaaggaagggtcaatcgtcttctcattccaaaaggacaatgactctgtgtct
gtgaaatctatcaagtctgaagtcaattacccatttacaaatatggagtctcacttctcg
gcttccaatgactctctgtctgagttccgggccaggattggacactcgtacagctgcaag
aaccaatcggtgatgatcaacgcgggattctacctggagaccagccagcagcaagttcag
gcctttaacatcaccaagggagacttcggaccagctgacttctgtcctgcagaccaaccc
aattacactgtggccatcgcagtgggcgtggtcttagccatcctgattgtcatcgtcatc
atcgcttacctcatcagcaggagacagcacccagctggataccagactctataa
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