Polyodon spathula (Mississippi paddlefish): 121306607
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Entry
121306607 CDS
T07273
Name
(RefSeq) GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121306607
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121306607
Surveillance factors
Other surveillance factors
121306607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
121306607
NCBI-ProteinID:
XP_041094356
LinkDB
All DBs
Position
48:594884..609743
Genome browser
AA seq
1027 aa
AA seq
DB search
MASVELQNLAEERKMAAETLNFGPEWLRALSSGGGVTSPPPSPAMPKYKLADYRYGREEM
LALYVKENKFPEEMQDKEFAAILQEEPLQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKG
GAAIPGGVARGRGTTRGGRGRGRGDGSFYQRSIEDSDLGFSRSGSREIHRSQSWDDRGER
RFEKPIRRDAVRVGFEEGAATGVRKEYTRSDSENWRTLREEQEEEEAAEGGGNSWRLAGV
RRDDGGPRSAGWREHVGERRRKFDFDFREHGEERGARRLRVSSEGFEEDRDGLPEWCTDD
EDDEMGTFDSSGAFMSLKKSSKDPIPEEQELEFQGVEEEEEHPEEYGSEPERRDAPEKDG
QVAAVCDLDSAATCPAPPSPPIVSVTPGQSSMSPGEVETPPPARPDPLDTAPPAAKGIKL
PPDEGGSLEVVAAQLSPGTSSTLSSSSSPPSSSAAIHFTTGGDNEDEDGMSHLQQEAEKM
VASLQENSLEEERFTHTMRESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTQEMAEWF
QAGYFTMTLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQERLKKQQELAA
AALYQQQLFQLINRCGEQGLIPAMNRSMSVPDTGSLWDMHTSASQQPGSEASSWDLTMNS
STSVPLRFFTKLQQERRDAELRAKREEEERKRREEKQRRLEAEQKRREEEELFRRKQCRQ
QQELIMKLLQQQQQGPAGSSMWSSMPKQGKTLLELQQETERQLQKQRGALQRSGHGGLGL
SGGNVSSMAGQWGSDQGAMWGAGGGHEGKNSSMGMWDEALKSQASGLRNLGLKTSRSSPS
LRRKTEEEEKLLKMLQGMRSQDGFTTWSEQMLHALNSNASTSNLDVSSIVSYLKEVESPY
EVHDFIRSYLGDTLEAKEFAKQFLERRAKQKANHQRQQQQLSKEVAGLTMNFPLQDAMRG
LNPSSLQAVFQSSHCSFKQAVYESDPSSKMKKQQHLGLHSDPSILGYSFHNPSDRMNLSE
IEPLEDY
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtagaactccagaatctagcagaggaaaggaagatggctgctgagaccctc
aattttggaccagaatggctccgcgcactatccagcggggggggcgtcacgtccccccct
ccctctcccgcgatgccaaagtacaagctcgccgattaccgatatgggcgggaggagatg
ttagcactttatgttaaagaaaacaagttcccagaggagatgcaggataaggagtttgct
gctatactccaggaagagcctttgcagccgctggccctggtacccctgacagaggaagag
cagaggaacttctcgatgtctgtaaacagtgtggctgtgctgaggctgatggggaaagga
ggggcagcgatcccaggtggagtggccagggggaggggaaccacgagaggagggagaggt
cgcgggagaggtgatggcagtttctaccaaagaagtattgaagactctgacctgggcttc
agccgtagcggcagcagggagattcacaggagccagagctgggacgacagaggagaaagg
aggtttgaaaagccgattcgaagagatgcagtccgggtgggcttcgaagagggagcggcg
acgggggtccgcaaggaatacacgcgctcggacagcgagaactggcgcaccctgcgggag
gagcaggaggaagaggaggcagccgaagggggcgggaacagctggagactagcgggggtc
cgcagagacgacgggggtcccaggtccgcgggctggcgggagcacgtcggggagcggagg
cggaagtttgatttcgatttccgggagcacggtgaggagcggggggcgcggaggctgcgt
gtgagcagcgagggcttcgaggaggacagggacgggctgccggagtggtgcacagacgac
gaggacgacgagatggggaccttcgactcctctggagccttcatgtccctcaagaagagc
tcgaaggatccgatcccagaagagcaggagctggaattccagggcgtggaggaagaggag
gagcaccccgaagaatacggctcggagccggaacggagagacgcccccgagaaagatggc
caggttgctgctgtgtgtgatctggacagtgctgcgacctgccctgcgcccccctcccct
cccatagtgtccgtgacccccggacagagctccatgtctcccggggaggtggagaccccc
ccaccggctcggccagacccgctggacaccgccccccctgctgccaagggaatcaagcta
ccccctgacgagggtgggtccctcgaagtggtggctgcccagctcagtcccggcacctcc
tccaccctctcctcctcgtcctcccctccctcctcgtctgctgctattcatttcaccact
gggggggacaacgaggatgaggacgggatgagccacctgcaacaggaggcggagaagatg
gtggcctccctgcaggagaactccctggaggaggagcgcttcacccacaccatgcgggag
agcaggaacacggcggccgcgctgcccctgtcgcacgaggctgccatgaagtggttctac
aaggatccgcagggagagatccaaggacccttcacgacccaggagatggcggagtggttt
caagccgggtatttcaccatgaccctcctggtgaagagaggctgtgatgagggcttccag
cccctgggagaggtcattaaaatgtggggaagagtgccttttgcccctggaccatcgcct
cccccgctgctgggtaatatggaccaggagaggctgaagaaacagcaggagctggcagca
gccgcactctatcagcagcaactgttccaactcatcaacaggtgtggagagcaggggttg
attcctgctatgaacagatcaatgtcagtgccagacacagggtccctgtgggacatgcat
acctcagcttcacagcaaccaggcagtgaagccagttcgtgggatttaacaatgaattca
tctacatcagttcctctccgttttttcactaagcttcagcaagaaaggagagacgcagaa
ctcagggctaagcgcgaggaggaggagaggaagaggagggaggagaagcagcgcaggctg
gaggcggaacagaagcggcgtgaggaggaagagctgttcaggaggaaacagtgccggcag
cagcaggagctgatcatgaagcttctccagcagcagcagcaggggcccgcgggctcctcc
atgtggagcagcatgcccaagcagggcaagaccctcctggagctgcagcaagagaccgag
aggcagctgcagaagcagagaggcgccctgcagagatccgggcacggaggcctgggtctg
tctggaggcaatgtgtccagcatggctgggcagtggggcagcgatcagggcgccatgtgg
ggggccggaggggggcacgagggcaagaacagcagcatgggcatgtgggacgaggccctg
aagagccaggcatcaggcctcagaaacctggggctcaagaccagtcggagcagcccctct
ctcagacgcaagacggaggaggaagagaagctgctgaagatgctgcagggaatgcggtcg
caggacggcttcaccacctggagtgagcagatgctgcatgccctgaacagcaatgccagc
accagcaacctggacgtctccagcatcgtctcgtatctgaaggaggtagagtccccctac
gaggtccacgatttcatccgctcctacctgggagacaccctggaagccaaagagtttgcc
aagcagttcctggagcgccgtgccaaacagaaagccaaccaccagcgccagcaacagcag
ctgtcaaaggaagtggctggactgaccatgaacttccctctacaggatgccatgcgcggt
ctgaaccccagcagtctgcaggctgtgttccagtccagtcactgctccttcaagcaggct
gtgtacgagagcgatccgtccagcaagatgaagaagcagcagcacctgggactgcactcg
gaccccagcatcctgggatattcttttcataacccctcagataggatgaacctgagtgag
attgagcctttggaggactactga
DBGET
integrated database retrieval system
