Polyodon spathula (Mississippi paddlefish): 121306702
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Entry
121306702 CDS
T07273
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121306702
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121306702
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
121306702
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
FORS blood group (Forssman antigen)
121306702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
121306702
NCBI-ProteinID:
XP_041094499
LinkDB
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Position
49:complement(1971292..1980362)
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AA seq
364 aa
AA seq
DB search
MFAWSPVTQHLAPGTMWNKGRSFLMIGLTVTVGLFTVVYVFRSNRTLLSVPKYTTLNPEL
VPIQREKLSVRIGSYSMSLHYPQPKSLTPPRSDVMTVTPWLAPVVWDGTFDTSIINSLYQ
PQNLTIGTTVFAIGKYTRFIKGFLETAEKHFLVGYKVNYYIFTDKPEDVPSVALGPQRNL
NVITVSKFSRWQEISMRRMERILNTIEERLLKEVDYLYCLDVDMLFHNHWGAEVLSTLVA
SIHPGYYKNLREVFPYERRPASQAYIPLDQGDFYYAGAMFGGLIQNVHALTKTCHQAILI
DKQNNIEAAWQEESHLNKYLLQYKPTKVLSPEYLWDDTKPKPPEIHFIRFSTVVKNYAEV
RENV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttggagtccagtgacacaacaccttgctcccggaacaatgtggaataaaggg
cggtccttcctgatgattggtctcactgtcaccgtggggttgtttacagtggtgtatgtg
ttccgttccaacaggactctgctttcagtccccaaatacacaaccttgaaccctgaactg
gttcccattcaaagagaaaagttatcagtgaggattggtagctattcgatgagtttacat
tatccacagccgaaatccctgacgccaccgagatcggatgtgatgacagtcaccccttgg
ttagcacctgtagtctgggatggaaccttcgacacttccataatcaacagcctgtaccag
ccacagaacctcacgataggaaccactgtgttcgctattggaaagtacacccggtttatc
aagggattcctggagacagcggagaagcacttcctggtgggctacaaggtgaactactac
atcttcactgacaagcctgaagacgtgccaagcgtggccctgggtccgcagagaaacctc
aacgtcattaccgtgtccaaattctcccgctggcaggagatctccatgaggaggatggag
aggatcctcaacaccatcgaagagcgtctcctgaaagaggtggactacctttactgcctc
gacgtggacatgctcttccacaaccactggggggcggaggtgctgagcacccttgtggct
tcaattcacccaggctattacaagaatctcagggaggtgtttccgtacgagcgccggcct
gcttcccaggcctacataccgctcgaccagggagatttctactatgccggagccatgttc
ggggggcttatccaaaacgtgcatgcactaaccaagacctgccaccaggctatactgata
gacaagcagaataacattgaagcggcctggcaggaagagagccacctaaataaatacctc
ctgcagtacaagcccaccaaagtgctatcaccagagtacctgtgggacgatacgaagccc
aaaccgcctgagatccacttcatccgcttctcaaccgtggtgaaaaactacgctgaggtc
cgggaaaatgtttag
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integrated database retrieval system
