Polyodon spathula (Mississippi paddlefish): 121306724
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Entry
121306724 CDS
T07273
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2 isoform X1
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121306724 (trub2)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121306724 (trub2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
121306724
NCBI-ProteinID:
XP_041094551
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Position
49:complement(120675..126087)
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AA seq
325 aa
AA seq
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MSMGSAARVYRSLQGLFAVYKPPGVHWKLVRDTVETNLIRDLNSLGSPAPRQAIRFLPGR
SEGADRSELTLTAARLPVLADHPLVTGPQFERLKVGAGHRLDVRSSGVFVLGVGHGNKML
TGMYSCHLTKEYTLQGLFGKATDDFSDSGRLVEKTTFDHITRDKLEKILAVIQGTNQKAL
LAFSGVDLKSQEAYEMAVKGLLRPLQKTPPVITGVRCVRFAPPEFTLEIQCLNETPQYLR
KLIHEIGLELRSAAVCSHVRRTRDGFFTLPDALLRSHWDLHSVGEAVRQAGPRVRAALSR
GEAEETDPGEGRGSGAEAEPRQGCS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggggagcgctgcccgtgtgtaccggtcgctgcagggtctgttcgcggtgtac
aagccgccgggagtgcactggaagctagtccgggacacggtggagactaacctcatccga
gatctgaactctctgggctcgcccgctcctcgccaggcgatccggttcctgccgggccgc
agcgagggcgctgaccgctccgagctcactctgaccgccgccaggctgcccgtgctcgcc
gaccatccgctggtgacggggcctcagtttgagcgtttgaaggtgggagccggacaccgc
ctggacgtgcgctcctcaggagtgtttgtgcttggagtgggccacgggaacaagatgctg
acgggcatgtacagctgccacctcaccaaggagtacactctccaggggctatttggaaaa
gccactgatgacttctcagactctggcaggctggtagagaagacgacattcgatcatatt
actcgggacaagctggagaagatccttgctgtgattcaagggacgaaccagaaagccctg
ctcgcgttctcaggggtggatctgaagagtcaggaggcctatgagatggcagtgaagggg
ttactgcgccccctgcagaaaacaccacccgtcatcacgggggtccgctgcgtgcgcttc
gcccccccggagttcacgctggagatccagtgcctgaacgagacgccccagtacctgcgg
aagctcatccacgagattgggctggagctgcgctcggccgctgtgtgctcgcacgtgcgc
cgcactcgcgacggcttcttcacgctgcccgacgcgttgctgcgctcgcactgggacctg
cacagcgtgggggaggccgtgaggcaggccgggccccgggtccgagcggcgctgagccga
ggggaggcagaggagactgacccaggagaggggaggggatccggggcagaggcagagccg
cggcagggctgctcctga
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