Polyodon spathula (Mississippi paddlefish): 121306756
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Entry
121306756 CDS
T07273
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2 isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121306756 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121306756 (dnai1.2)
04812 Cytoskeleton proteins [BR:
pspa04812
]
121306756 (dnai1.2)
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Dynein arm
121306756 (dnai1.2)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121306756 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
EIF3I
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
121306756
NCBI-ProteinID:
XP_041094601
LinkDB
All DBs
Position
2:complement(106486879..106539658)
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AA seq
696 aa
AA seq
DB search
MPFKAGTQKSKQVSSQAASQSVKAPPPKQAKAASKKKDDDDTTEMGEGEEWMQGKTLFKP
PDQLELSEVELKEEITRILTANNPHAPQNIVRYSFKERAYKPISNVDQLAIHFSLDGNML
HKDSDEARRQAAKMGISERTTTTETSTRETEERTEAPASLEEAGEVEEGVRGADSRKGKR
EQKITNQFNFSERASQTLNNPLKERESQTEPPPRANFSASANQWEIYDSYVDDLAKQERN
KEKQKAPPTKKEDDKSKKKMTSIETQSDDITKVAKSSKIIERMVNQNTFDDIAQDFKYFQ
DASDEFREQEGTLLPLWKFQYDKAKRLAVTALCWSQTYKDMYAVGHGSYDFTKQSRGMLL
FYTLKNSTFPEFIFPTNSGVMCLDIHKVHPYLVAVGFYDGCVAVYNLKEGGVQPAFRSTA
KCGKHTDPVWQVKWQKDDMDNNQNFFSVSSDGRVVSWTLVKNELVYMDIIKLSLDGAMMD
GPEGMQLHTTACGTSFDFHKQTDYLFLVGTEEGKIHKCSKAYSSQFLETYQAHNMAVDAV
RWNHFHPKVFISCSSDWTVKIWDHTIKTPMFTFDLNAAVGDVAWAPYSSTVFAAVTTDGK
VHVFDLSVNKYEAICEQLVVAKKKTKLTHIEFNPVHPIIIVGDDRGCVTSLKLSPNLRRQ
PKEKKGQEVPKGPEVEVAKMEKILNLLREPESLDNK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaaagcaggaactcagaagtccaaacaggtttcaagccaagctgcatcccag
tcagtaaaagcacctccaccaaagcaagccaaagctgcctccaagaagaaggatgatgat
gatacgactgagatgggagaaggggaggagtggatgcagggaaaaacccttttcaaaccc
ccggatcagctggagctctctgaagttgaactgaaagaggagattacaagaatcctaaca
gcaaacaaccctcacgcccctcagaacattgtgcgctacagcttcaaggaacgagcatac
aaaccaatcagcaatgtggaccagctggctattcacttctcactggatggaaacatgcta
cacaaggactctgatgaagcaagacgacaagcggcaaagatgggaatctcagaaagaaca
accaccactgaaacgagtaccagagagacagaagagaggactgaagctccggccagtttg
gaagaggcaggagaagtggaggagggagtccgcggtgctgacagccggaaggggaaacgt
gaacaaaaaatcaccaaccagtttaacttcagcgagagagcctcccagacactcaacaac
cccctgaaggaaagagagtcacagacagaacccccaccccgagcaaacttttcagcctca
gccaaccagtgggaaatctatgactcttacgtggatgacctcgcgaaacaggagaggaac
aaagagaagcagaaagcaccccctaccaaaaaagaggacgataagtccaagaaaaagatg
acttccattgagacacagagtgatgacatcacaaaggttgccaagtcttctaaaatcatt
gagcgaatggtgaatcagaacacatttgatgacatcgcacaggatttcaaatattttcaa
gatgcttctgatgagttcagggagcaggagggcaccctactgcctctgtggaaattccag
tatgacaaggccaagagactggcagtaactgccctctgctggagccagacctacaaagac
atgtatgcagtgggtcatggctcttatgacttcacgaagcagagccgtgggatgctcctc
ttctacaccctgaagaactccaccttccccgagttcatcttccccacaaacagcggggtc
atgtgcctggacatccacaaggtgcacccctacctggtggcggtgggcttctacgacggc
tgcgtggccgtgtacaatctgaaggaagggggggttcagccagccttcaggagcacggcc
aagtgtgggaaacacacagaccccgtgtggcaggtaaaatggcaaaaagatgacatggac
aacaatcagaattttttctctgtgtcctcagatggaagagttgtttcctggacgctggtg
aagaatgagctggtttacatggatattatcaagctgtctctggacggagccatgatggat
gggcctgaggggatgcagttgcacactacggcatgtggaacctcatttgacttccacaaa
caaacagattatcttttccttgttgggaccgaagaaggcaaaatacacaagtgttccaaa
gcctactccagccagttcctggagacctatcaagcccacaacatggctgttgatgcagtg
cgctggaaccactttcaccccaaagtgttcatctcctgcagttcagactggacagtcaag
atctgggatcacactatcaagaccccgatgttcacctttgacctgaatgcagctgtcgga
gatgtagcctgggctccttactcctctacagtattcgcagccgtcaccacggatgggaag
gtgcacgtcttcgatctgagtgtgaataagtatgaggcaatctgtgagcagctcgtggtg
gcaaagaagaaaaccaagctgacccacattgagtttaaccccgtccaccccatcatcatc
gtgggagatgacagaggctgtgtcaccagcctaaagctgtcacctaacctgcgcaggcag
ccaaaggaaaagaaagggcaggaggtgcccaagggacccgaggtggaggtcgcaaagatg
gagaaaatcctgaacctactgcgggagccagagagcctggacaacaaataa
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