Polyodon spathula (Mississippi paddlefish): 121306780
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Entry
121306780 CDS
T07273
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121306780
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
121306780
NCBI-ProteinID:
XP_041094640
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Position
50:2203989..2214767
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AA seq
586 aa
AA seq
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MKGQLVYFLSWTLHFLSRPALLEACTTGTAAECKEADFVPGYNLAGEGFDIVKMERKRAY
VINVHSWKRKDGTCTLCKNPFLENVAQKLPLSVVDWRALPKCSSKISSTIHQSSESLVNS
STSSIENNWSTELGITQLKGSGNLLLAGSHSRLAEYSMEKTKSDKFSFTSHETSCNFYSY
RVVDEPRLHREFGCTVKKLPRNYDGQSKPLYYKLIDTYGTHYVKKVLLGGKVKSTTSIKT
CRTALDGLTANDVKDCLDVEASATVHGKVTVDMQAKVHHCQELKKRSSNKQCFHDSFNDR
QTEITGGKAMSADLLFSTTSDPSAYQEWMESLKTTPDMISYALEPLHNLIRFKGPVKDNL
KKALVEYIMGKGLQRSCSGKCATGSRSNLGDSCSCVCHSGAGIDSMCCPTQRGLAKLTVK
VIKGEKLWGDYHTKTDGFVKVFLGDTMRRTKIVHENDNPRWNEIFDFGSVTLTLATELKF
EVWDEDSGWDDDLLGSCSRKLEKGSQEDLCALNHGNLFFSYTLECGPSLGGPTCGEYVPS
PMSAELMKRFVSRNAMPVPRSLVAEMMKGYSGLDPSSASGNRSREE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcagcttgtctacttcctgtcctggacccttcacttcctgtctcgccccgcc
ctcctggaagcctgcaccactggcacggccgccgagtgcaaagaagctgacttcgtgcca
gggtacaacctggcgggagaaggcttcgacatcgtgaagatggaacgcaagcgcgcttac
gtcatcaatgtccactcctggaagaggaaagacgggacctgcaccctttgcaagaacccc
tttctggagaacgtggctcagaagcttcctctgtccgtggtagactggcgggcccttccc
aagtgcagctcgaagatctccagcaccatccatcaatcaagtgagtccctcgtcaactcc
agcacgtcttccatagagaacaactggtcaacggaactgggtattacacaactgaagggg
tcggggaacctgctgctggcggggtctcattcccggctggccgagtactctatggagaag
accaagagcgataagttcagcttcaccagccacgagacctcctgcaatttttacagttac
agggtagtggacgaacccagactccacagagagtttggctgcaccgtgaaaaaactccca
aggaactacgacggccagagcaagcccctgtactacaagctgatcgacacgtacggcacg
cactatgtgaagaaggtgctgctgggcggcaaagtaaaaagcaccacctccatcaaaacc
tgcagaaccgcgctggacgggctgaccgccaacgacgtgaaggactgccttgacgtggaa
gcctcggccacggtgcatggcaaggtcacagtggacatgcaggccaaagtccaccactgc
caggagctgaagaagaggagcagcaacaaacagtgcttccacgactccttcaacgaccgg
cagaccgagatcaccgggggcaaagccatgtccgccgatctccttttctccaccacctcg
gaccccagcgcttaccaggagtggatggagagcttgaagaccaccccggacatgatctcc
tacgcactggagcccctgcacaacctgattcgtttcaaaggccccgtcaaggataacctg
aagaaggccttggtcgagtacatcatgggaaaaggcctccaacgcagctgctccgggaaa
tgcgccacggggtcccggagcaacctgggagactcctgctcctgcgtgtgtcacagcggc
gcgggcatcgacagcatgtgctgcccgacccagagggggctggccaagctgacggtgaag
gtgatcaagggcgagaaactctggggcgactaccacaccaaaactgacgggttcgtgaag
gtcttcttgggggacacgatgcggcggaccaaaatcgtgcacgagaacgacaacccgcgc
tggaatgagatcttcgatttcgggagcgtcacgctcaccctggccacggagctgaagttc
gaggtctgggacgaagacagcgggtgggacgacgaccttctgggaagctgctctcggaag
ctggagaaagggtcccaggaggacttgtgcgccctcaatcacgggaacctcttcttctcc
tacaccctggagtgcggacccagcttgggcggcccgacctgcggggagtacgtgccctcg
cccatgagcgccgagctgatgaagaggttcgtgtccaggaacgccatgcccgtccctcgc
agcttggtggcagagatgatgaagggctactccgggctggacccttcgagcgccagcggc
aaccgcagcagggaagagtag
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