Polyodon spathula (Mississippi paddlefish): 121306854
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Entry
121306854 CDS
T07273
Name
(RefSeq) RNA-binding protein FUS-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121306854
09122 Translation
03015 mRNA surveillance pathway
121306854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121306854
Spliceosome [BR:
pspa03041
]
Complex A
Other components
Complex A specific factors
121306854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121306854
NCBI-ProteinID:
XP_041094759
LinkDB
All DBs
Position
50:complement(1487099..1504477)
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AA seq
611 aa
AA seq
DB search
MASNDYSQTAAQGYGPYGAQTGQGYTQPAAQAYGQQSYSSYGQSSDTSAAAYSQGGYSST
YGQTQTGGYGAQPASQGYSQSSQAYGAAGYGSSQPSQSSYGQQSSYPGYGQQQPASASSA
TSYSSGSQAPSGYGQPQSGGGAGANAGAATGGGYGTQGGYAGQGQGQPPQQGGASGGGGA
AGHYSQQPSYNTPPPQSYSQQQGQYSQGGGGGGSGAGGMGKAPLLNHTHSSYSAGGGAPP
PGSQAHTTGSSGYSNQQQPHPGYPSPHPAHAYGSHQYGAAEGYGQEPPQMGGGYGGPESG
GYGGQDSRGRSRGGGFGGRGGFDRGGRGGPRGRGGMGSGDRGGFNKFGGPRDQGPGGPVP
MPEQDNSDNNTIFVQGLGDSCTVDSVADFFKQIGIIKINKKTGLPMINLYTDRETGKLKG
EATVSFDDPPSAKAAIDWFDGKEFCGNPIKVSFATRRPDFVRGGGNMRGGRGRGDMPFRS
EGPMGRGGFGGGRGGGGGGGFPSSNGGGGQQRAGDWKCSNPVCGNLNFSWRNECNQCKAP
KPEGAGGPPPMGGGFGGDRGGRGGFDRGGFRGRGGDRGGFRGGRGGDRGGFGPGKMDGRG
EHRQDRRDRPY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaacgattattctcagacggcagcacaagggtatggaccttatggtgctcag
actggtcaaggctatacccagccagctgcccaagcctatggccagcagagctacagcagc
tatgggcagtcctcggacaccagtgcagcagcttacagccaaggagggtatagctccacc
tatggacagacccagacaggtggctacggcgcccagcctgcctctcaaggctacagccag
tccagtcaggcgtatggagccgctggttacgggagcagccagccctcccagagcagctac
ggacagcagtcctcatacccgggctacgggcagcagcagccagcctccgcgtcctctgcc
accagctacagcagtggctcccaggctccctctggttatgggcagccccagagtggaggt
ggagccggggccaatgctggggccgccacaggggggggttatggcacccaggggggctat
gctgggcagggtcaggggcagcccccccagcagggaggagctagcggagggggaggagca
gcaggacactacagccaacagcccagctacaacacccctccaccccagagctacagccag
cagcaggggcagtacagtcaaggaggaggaggaggaggaagtggggcaggaggtatggga
aaggctcctttactaaaccacacacactccagttacagtgctggtgggggggcgccccct
cctggctctcaggcgcacacgaccggcagcagtggctacagcaaccagcagcaaccacat
cccggctaccccagcccacaccctgcgcacgcttacgggagccaccagtacggagctgcg
gaagggtacggtcaggagcctccccagatgggagggggctatgggggtcccgaatctgga
gggtatggagggcaagacagcagaggccggagcaggggcggtggttttggaggaagggga
ggattcgacaggggaggaaggggaggaccccgaggaagagggggcatgggcagtggagac
agaggtggcttcaataaattcggtggacctagagatcaaggacctggagggccggtccct
atgccagaacaggataactctgataacaacacgatatttgtgcagggcttgggggacagc
tgcactgtggactctgtggctgacttcttcaagcagattggcatcatcaagattaacaag
aagactggcctgcccatgatcaacctgtacactgaccgggagaccgggaagctgaagggg
gaagcgacggtctctttcgacgaccctccctctgccaaagcagctatagactggtttgat
ggcaaggaattctgtgggaatccaatcaaagtttcctttgctacccgccggccagacttc
gtgagagggggcgggaacatgcgagggggacgtggcagaggagatatgccttttcgctct
gaagggcccatgggaagaggtgggtttgggggaggcagaggaggcggcggtggggggggc
ttccccagcagcaatggagggggaggccagcagagagccggggactggaagtgttcaaac
cccgtttgcggaaacctcaacttctcctggagaaacgaatgtaaccagtgcaaagctccc
aaaccagagggggctggcgggccccctcccatggggggcggttttgggggtgatcgcggt
ggccgaggaggttttgaccgcggtggcttccgggggcgcggtggagaccgggggggcttc
cgaggagggagagggggtgacagggggggcttcggacctggcaaaatggatggcagaggt
gaacacagacaggaccggagagacagaccttactaa
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