Polyodon spathula (Mississippi paddlefish): 121306870
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Entry
121306870 CDS
T07273
Name
(RefSeq) LIM domain-containing protein ajuba-like
KO
K16682
LIM domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121306870
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306870
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121306870
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
121306870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
121306870
NCBI-ProteinID:
XP_041094787
LinkDB
All DBs
Position
50:2544563..2552901
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AA seq
739 aa
AA seq
DB search
MDRLGSRLLEKLKLTDSGSVKFSRKKDDSCNNAQNTASAKPAGKTKRGSPQEKLSGLNRG
TAGVYQQLSRGGSVQPAAGASVDAGSGGGFTGLRCSTGSVDANTAEYALAERGPGTSFDS
HRRHSVEARHGAGLQPADCNNTAKDCGVHDSEFNRGDSSNGSRRYSLEIQQQLIQQQNFP
GFNKRFSGSEFFELPAQSSERSKRFSLQESGTKRFSTSSDFSDRHGFYQRQSDPSSVPGY
YPPLYNNAGSGNSKGLSPRSSYSLYESILTSPRSSFASTASGGDGNSSPRMSVNFESRSS
SNRTSGISIGYDSRPGFGGSGAESPQSSACAGLQQPPPGCQLFYSPYSSLAAAAGSAHYH
PPDCWGVDFETEAAFMYQQRGLYLGGCQDNRHSYPPALGSPAAAAGFFERGSTRRSITGY
PLKQARSSAGTRYQQELAYLLSRDRRLEGQAGAVNGTAAQETQAPASIPASVGSAQNSHG
AVTPAPALSSKQQGALILQVSSARVSHTLTRPQEPPTRAQPGREPGELKEEYFGTCLKCN
KGVYGSDNACQALDSLFHTRCFICSSCGRTLRGKAFYNVNGSVYCEEDYMFFGFQQAAEK
CCVCGHLILEKILQALGNSYHPGCFRCVVCNKTLDGVPFTVDYSNKVYCVSDYHRIFAPK
CSSCGQPILPAEGSEEIFRVVSMNKDYHSECYHCEDCRLQLSDREGQQCFPLDGHLLCHC
CHMTRASAQQQAPSLSYKH
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttgggaagcagactccttgagaaattgaaacttaccgactccggcagcgtt
aaattcagcaggaagaaagacgactcttgcaataacgcgcagaacacggctagcgccaaa
ccggccggtaaaacaaagcgagggtcgcctcaggagaaactgtccggcttgaacagaggg
accgccggggtgtatcagcaactctcccgggggggcagtgttcagccggccgctggggct
tcggttgacgccggctcgggaggcggttttactggtctccggtgctccaccgggagtgtg
gatgctaacacggcggagtacgcactcgctgaacgcggtcccgggacgagctttgattcc
cacagacgccactccgtggaagcgagacacggcgccggcttgcagccagcggactgcaat
aatactgccaaagattgcggtgtccacgacagcgaattcaaccggggcgacagcagcaac
ggtagccggcgttattctctggaaattcagcagcaactgattcagcagcagaatttcccg
gggtttaataagcgttttagcggcagcgagttttttgagttgccggcacaaagtagcgag
cgatccaagcggttctccttgcaggagtcgggcaccaagcgcttcagtacaagcagcgac
ttttcggacaggcacggcttttaccagcggcagtcggaccccagctcggttccaggttat
taccccccgctttacaacaacgctgggagcggcaacagcaagggcttgagtccccgctcc
tcgtacagtctctacgagtccatactgaccagcccgcggtccagctttgccagcacggcc
agcggcggtgacgggaacagcagcccccgtatgagtgtcaacttcgagagccgttcaagc
agcaaccggaccagcggtatcagcataggctacgactccaggcccggcttcgggggctcc
ggcgcagaaagccctcagtccagtgcctgcgccggtctgcaacaaccaccgccggggtgt
caattattctacagcccgtattctagcttggcagcagcggcagggtcagctcattaccac
ccaccagattgctggggagtggactttgagaccgaagcagctttcatgtatcagcaacgg
gggctgtatcttggggggtgccaggataatcggcactcgtatccgcccgctcttggcagc
ccagcggcggcggcaggatttttcgaaaggggctcgacccgtcgctccatcacaggctac
ccactgaagcaagcccgcagctcggctgggacacgttaccagcaagagctggcgtatctg
ctgagcagagaccgccgtttggagggtcaagccggcgcagttaatgggaccgcggctcaa
gaaacgcaggcgcccgcttctatcccagcctctgttggtagcgcccagaatagccacggt
gccgtcacccctgcccccgcactgagcagcaagcaacagggcgctcttattctccaggtc
agctctgcccgggtgagccacactctcacccgtccccaggagccaccgacgcgggcacag
ccaggacgggaaccgggggagttgaaagaggaatatttcggcacgtgtttgaagtgtaat
aaaggggtctatggctcggacaatgcctgtcaagcactggacagtctgtttcacacacgc
tgttttatctgcagctcctgtggcaggacgctcagagggaaagccttttacaatgtgaac
ggctcagtctattgcgaagaggactacatgttttttggtttccagcaagctgctgaaaag
tgctgtgtttgtgggcatctcatcctggaaaaaattttgcaggcactcggtaacagttat
caccctggctgcttccgctgcgttgtctgcaacaaaaccctcgatggcgttcctttcact
gtggattattccaacaaggtgtactgtgtcagtgactaccacaggatttttgcaccgaaa
tgttcctcctgtggccagcctattctacctgcagagggctccgaggagatattcagagtg
gtctccatgaacaaagattaccactctgagtgttaccactgcgaggactgcaggctgcag
ctcagcgatagagaagggcagcaatgcttcccattggatggacatctgctgtgtcattgc
tgtcacatgacgagagccagcgcgcagcaacaagcaccttccctcagctacaagcactga
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