Polyodon spathula (Mississippi paddlefish): 121306925
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Entry
121306925 CDS
T07273
Name
(RefSeq) ADAMTS-like protein 4
KO
K23369
ADAMTS-like protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121306925
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121306925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
ADAMTS_CR_3
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
121306925
NCBI-ProteinID:
XP_041094885
LinkDB
All DBs
Position
51:complement(334752..371809)
Genome browser
AA seq
1717 aa
AA seq
DB search
MQSAPGRTAGRHCLFAALLGCFMLIIQLTNANKKDSGRTSRQAPGPAEGGSRAGVWAPWG
RWSSCSKSCGLGIVERRRTCLSPLPEPLQPWRDGLGTTTQGGYGAVLSAVRPPEYPPSHP
LFVSSPENRLAVPWNPSPHHSLAANQEPVSVYRDAQDVAAFYRPDFPPASEERLSLYRQG
SPLEEQGTGTRLSPPSAQEDTARRLRPYQDRSANRGVGGGNRRSVLANQELQLSRRPPPH
GSIQPGRYGYGKVPFALPLHRSNKHSDRKSRRARHDPQNRTEERGDPQNRTEERHDPQNR
TEERGDPQNRTEERGDPQTGTETASLLQRRRREEGSGQERRLERGEVSDREGGDEGHPAS
GGSSAKSRDGEGSEEGGAREGEIQLGQRDRGEGDSERGVGEGTEAGVKEPERGERGERGE
RGEQGGGQPSRESQELRQNRTGPQPRPGAPAPGASPVPVPGDRDRAPSQGRAPLEVDQRP
STRALHRPAPRPPVASVRHWGGSSSSSTRGGYGPQRYSDPWLPHSRDPSNLFRGEGGPLA
SSQSQANWELYRPASASPAYLCHGQQNEHKTCTLEACPGGAVDPRAAQCSGFNSQEFMGR
RYDWEPFLEGLAGWLVTNCELHCPPLLGSGLRDATRSGSDGTPARGILLGVCTRDTAGCG
VCGGDSTTCRRVAGTFQNSSVPIGYHAFLKIPPGATRITITERERDTPTHQLTWPGRYGY
GKVPFALPLHRSNKHSDRKSRRARHDPQNRTEERGDPQNRTEERHDPQNRTEERGDPQNR
TEERGDPQTGTETASLLQRRRREEGSGQERRLERGEVSDREGGDEGHPASGGSSAKSRDG
EGSEEGGRVLVSSRLWREGREGEEVSEVRRALSVLDLSTVRENRTGPQPRPGAPAPGASP
VPVPGDRDRAPSQGRAPLEVDQRPSTRALHRPAPRPPVASVRHWGGSSSSSTRGGYGPQR
YSDPWLPHSRDPSNLFRGEGGPLASSQSQANWELYRPASAFPAYLCHGQQNEHKTCTLEA
CPGGAVDPRAAQCSGFNSQEFMGRRYDWEPFLEAGGGYQHCELHCRPVGFRFYVRHAERV
WDGTPCQGNSSSVCIAGHCLSPGCDGVLGSNLTLDSCGVCGGDSTTCRRVAGTFQNSSVP
IGYHAFLKIPPGATRITITERERSPNYLALRTGSGHSVINGRWAVDPPGQYEAGGTLFQY
RRGGAGGEMLTAPGPTTTVLVVYIIFHKKNPGIDYEFYLPAERRRAEEPEREHRERQGFS
ECVCTPVIGGVTPLREARPAPLSRGSARNVRIPPRTDLPPHSLPDFLWRRVGLTDCSASC
GKGSQAPLFRCVSRKTQQEVEDSKCDPTTKPAPVEEACNVQPCPAFWEAGLWSGCSKSCG
QGEQQRQVQCRQVYGAHSTMVQPQLCTSLLRPNSTQPCQLRICSHWEIHSNWSSCSVMCG
QGQRTRSVRCVSTSGVTVSDSECSTGLRPRGNEVCNMGPCVRSWLSSDWSNTCSVECGTG
VQRRSVVCLASRADGQPEQSCSGAKPAELRACSGGACQPSTRWYTGPWSECNVECGNGTQ
RRDIICVNKLGADFNVTPARDCAHLEKLPSVQECSVGPCRAKWYTTQWSACSRSCVGGVQ
EREVRCLTEDKVLSQQCDLDLKPAEKQSCNTQPCTGETDENCKDTHHSCPLVVQARLCVY
SYYRTVCCAACAHGAERSKRQRERERERERERERERH
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgcaccgggccggaccgcgggcaggcactgcctctttgccgctctgctgggc
tgtttcatgctgatcattcagctcaccaatgccaacaagaaggattcgggccggacgagc
aggcaggcaccgggccctgcagaggggggctctcgagcgggggtctgggctccatggggc
cgctggtcttcctgctctaagagctgtgggctggggatagtggagaggaggaggacctgc
ctgtcgcccctcccagagccgctgcagccctggcgggacggcctgggaaccacgactcag
ggggggtacggggctgtgttatcggctgtgcgccccccggaataccccccctcgcacccc
ctcttcgtgagcagcccggagaacagactggcagtgccctggaaccccagcccgcatcac
tccctggcagccaatcaagagccagtatccgtttacagagacgcccaggatgttgccgca
ttctacaggccggacttcccaccagccagtgaggagaggctttccctgtacaggcaaggc
tccccattggaggagcaggggacgggcactcgcctgagcccgccctctgctcaggaggac
acggcccggagactccgcccctaccaggacaggtcggccaatcggggagtggggggcggg
aacagacgctctgtgttggccaatcaggaacttcagttgtccagaagacccccccctcac
ggctccatccagccgggtcgctacggatatggcaaagttccgttcgccctgcctctgcat
cggagcaacaagcactccgaccggaagagccgacgagcgaggcacgacccccagaacagg
accgaggagaggggggacccccagaacaggaccgaggagaggcacgacccccagaacagg
accgaggagaggggggacccccagaacaggaccgaggagaggggggacccccagaccggg
acagaaacagcgtcgctgctccagaggaggagaagagaggaaggatctgggcaggagagg
aggctggagcggggggaggtctcagacagagaggggggagacgaaggacaccctgcttct
gggggttcatctgctaagagccgggatggggaggggagtgaggaagggggggcgagggaa
ggggagatacagctagggcagagggataggggggagggagattcagagaggggggtcggg
gaaggaactgaggcaggagtcaaggaaccagagagaggggagagaggggagagaggggag
agaggggagcagggggggggacagcccagccgggagagccaggagctcagacagaacaga
accggaccccagcccaggcccggcgcacctgcgccaggagcctcgccagtcccagtcccg
ggtgacagagacagggcccccagtcagggaagggccccgctggaagtggatcagagaccc
tccactagggccctgcacaggccagccccccggccccccgtggccagcgtccgacactgg
gggggctcctcctcctcctccactagggggggctacggcccccagcgttactccgatccc
tggctcccacactcccgggacccctcaaacctgttccggggggaggggggcccccttgcc
agctctcaatcccaggctaactgggagctgtaccgccctgccagcgcctcccctgcctac
ctctgccacggacagcagaatgaacacaagacctgcaccctggaggcttgtccagggggc
gctgtggacccgcgagcagcgcagtgctccgggttcaattcccaggagttcatgggccgg
aggtacgactgggagccgttcctggagggtcttgcagggtggttggttaccaactgtgag
ctgcactgcccgcccctgttgggttccggtttacgtgacgccacgcgaagcgggtcggac
gggacccctgccaggggcatcctcctcggtgtttgcacgcgggacactgccggttgtgga
gtgtgtgggggcgacagcaccacctgcaggcgggtagcaggaacattccagaacagcagc
gttccgatcggataccacgcgttcctaaagatccctcccggagccacgcgcatcaccatc
acggagagggagagggacacccccacgcaccaacttacctggccgggtcgctacggatac
ggaaaagttccgttcgccctgcctctgcatcggagcaacaagcactccgaccggaagagc
cgacgagcgaggcacgacccccagaacaggaccgaggagaggggggacccccagaacagg
accgaggagaggcacgacccccagaacaggaccgaggagaggggggatccccagaacagg
accgaggagaggggggacccccagaccgggacagaaacagcgtcgctgctccagaggagg
agaagagaggaaggatctgggcaggagaggaggctggagcggggggaggtctcagacaga
gaggggggagacgaaggacaccctgcttctgggggttcatctgctaagagccgggatggg
gaggggagtgaggaaggggggcgtgtccttgtctcctcccggctctggagagaggggaga
gagggtgaggaggtgtctgaggttcgccgcgcgctctcggtcctcgatctgtctacagtc
agagagaacagaaccggaccccagcccaggcccggcgcacctgcgccaggagcctcgcca
gtcccagtcccgggtgacagagacagggcccccagtcagggaagggccccgctggaagtg
gatcagagaccctccactagggccctgcacaggccagccccccggccccccgtggccagc
gtccgacactgggggggctcctcctcctcctccactagggggggctacggcccccagcgt
tactccgatccctggctcccacactcccgggacccctcaaacctgttccggggggagggg
ggcccccttgccagctctcaatcccaggctaactgggagctgtaccgccctgccagcgcc
ttccctgcctacctctgccacggacagcagaatgaacacaagacctgcaccctggaggct
tgtccagggggcgctgtggacccgcgagcagcgcagtgctccgggttcaattcccaggag
ttcatgggccggaggtacgactgggagccgttcctggaggcagggggtggttaccagcac
tgtgagctgcactgccgccctgttgggttccggttctacgtgcgccacgccgagcgggtc
tgggacgggaccccctgccaggggaactcctcctcggtgtgcatcgcgggacactgcctg
agtcctggctgtgacggggtcctgggttcgaatctcaccctcgatagttgtggagtgtgt
gggggcgacagcaccacctgcaggcgggtagcaggaacattccagaacagcagcgttccg
atcggataccacgcgttcctaaagatccctcccggagccacgcgcatcaccatcacggag
agggagaggagccccaactacctggctctccggacaggcagcggtcactctgtgattaac
gggcgctgggcggttgacccccctggtcagtatgaggcgggggggacgctgttccagtat
cgtcgggggggcgcggggggggagatgctgaccgccccgggacctacaaccaccgtgctg
gtcgtctatattatttttcacaagaagaatcccgggattgattatgaattctacctgccg
gccgagaggaggagagcagaggagccggagagagagcacagggagaggcagggattcagt
gagtgtgtgtgcacccccgtcattgggggagtaaccccgctgagagaggccagaccggcc
cccctttctcgaggctccgcccgcaacgtcaggatccccccccgcacagatctgcccccc
cactcgctgcctgacttcctgtggaggagggtggggcttacagactgctctgcttcctgt
ggcaaaggatcccaggccccgctgttccgctgtgtctcccggaaaacccagcaggaagtg
gaggacagcaagtgcgacccgaccacaaagcccgcccccgtggaagaggcctgcaacgtg
cagccgtgcccagcgttctgggaggcggggctctggtctggctgcagtaagtcctgtggc
cagggggaacagcagaggcaggttcagtgcaggcaggtctacggtgcccacagtaccatg
gtgcagccgcagctgtgcaccagcctgctcagacccaacagcacgcaaccctgccagctg
cgcatctgcagccactgggagatccacagcaactggagctcctgctctgtgatgtgtggt
cagggtcagcgcacacgctcagtgcgctgtgtcagtaccagcggcgtcacggtgagtgac
agtgagtgcagcactggactgagaccccgcggaaacgaggtctgcaacatggggccctgc
gtgcgcagctggctcagctccgactggagtaacacttgctcagtggagtgtggaacgggg
gtccagcgtcgctcggttgtctgcctggccagtcgagctgacggccaaccagagcagagc
tgcagcggggccaagcctgcagagctgcgagcgtgcagcgggggggcatgccagcccagc
acgaggtggtacacaggaccctggagcgagtgcaatgtggagtgcgggaatggaacccag
cgccgtgacatcatctgtgtcaacaaactgggggccgatttcaacgtgacaccggcccgg
gactgtgcacatctggaaaagctgccctccgtgcaggagtgcagcgtgggaccctgcaga
gccaagtggtacacaacacagtggagcgcgtgttccaggtcttgtgtgggcggagtccag
gagcgggaggtacggtgtctcacggaggacaaagttctgagccagcagtgcgaccttgac
ctgaagccagctgaaaagcagagctgcaacacacagccttgcactggagagacagatgag
aactgcaaagacacgcatcacagctgccccctggtggttcaggcgcgcctctgcgtttac
tcgtactacaggacagtgtgctgcgctgcctgtgcgcacggagcagagcggagcaagaga
caaagagagagagagagagagagagagagagagagagagagagagagacactga
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