KEGG   Polyodon spathula (Mississippi paddlefish): 121306934
Entry
121306934         CDS       T07273                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121306934 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121306934 (sf3b4)
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121306934 (sf3b4)
 Complex B
    121306934 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    121306934 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 121306934
NCBI-ProteinID: XP_041094894
LinkDB
Position
51:complement(794640..800511)
AA seq 341 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPSLSAPSPVITAMGPGMPPPGMPPP
GAFPPPGPPPGMMPGMHPHSMPPSSGVPGPPTGGAPGSGPPPGPPPFPHGAMHPGMPQMQ
MHPPGPPGMVPPPPGLGGQAPVRVVVGVGGPYVGGPGGVYP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatctcggagcgaaaccaagatgccactgtgtacgtgggaggcctg
gatgagaaagtgtccgaaccgttgctatgggaactgttcctccaggcagggccggtggtc
aacactcacatgcccaaggacagagtgaccgggcagcatcaaggttatggcttcgtggag
ttccttagcgaggaggacgccgactacgccatcaaaatcatgaacatgatcaagctgtac
ggcaagcccatccgcgtcaacaaggcgtcggcccacaacaagaacctggacgtgggggcc
aacatcttcatcggcaacctggaccccgagatcgacgagaagctgctctacgacaccttc
agcgccttcggggtcatcctgcagacccccaagatcatgcgggaccccgacacgggcaac
tccaaagggtacgccttcatcaactacgccagcttcgacgcctctgacgcggccatcgag
gccatgaacgggcagtacctgtgcaaccggcccatcaccgtgtcctacgccttcaagaag
gactccaagggggagcggcacggctccgcggccgagaggctgctggccgcccagaacccg
ctctcccaggccgaccggcctcaccagctgttcgccgatgcccccccttccctctccgcc
ccctcgcccgtcatcaccgccatggggcccggcatgccccctccaggcatgccccctccc
ggcgccttccctcccccggggcccccccccgggatgatgcccgggatgcaccctcattcg
atgcccccctcctctggagtcccgggaccaccgacaggaggagcaccaggctcgggaccc
ccccctggaccgccccccttcccccacggagccatgcacccaggaatgcctcagatgcaa
atgcacccccctggccctccaggaatggtgcccccccccccgggactcggaggccaggct
ccggtccgagtcgtggtgggggtgggcggtccgtacgtgggggggcctgggggtgtgtac
ccgtag

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