Polyodon spathula (Mississippi paddlefish): 121306951
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Entry
121306951 CDS
T07273
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121306951 (rnf115a)
04121 Ubiquitin system [BR:
pspa04121
]
121306951 (rnf115a)
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121306951 (rnf115a)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121306951 (rnf115a)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121306951 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-C3HC4_3
zf-RING_16
zf-RING_6
Rad50_zn_hook
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
121306951
NCBI-ProteinID:
XP_041094909
LinkDB
All DBs
Position
51:complement(1286029..1292675)
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AA seq
282 aa
AA seq
DB search
MAEAAAVSRHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVADDSSLLESGASAVNDDAA
MQFSELWHLLFVERPFSLDLDSRESAERQQLSGSEHWGPGRPTRLQNQRRYRSRGTTRPE
RSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFE
NTGPPPAEKEKICSLPTVTVSQEQVDSNVECPVCKEDYSLGEPVRQLPCSHLFHSDCIVP
WLEMHDTCPVCRKSLSGEDATRQSLDAPSLNGDARPQERWSS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggctgccgcggtttcaagacatcgcttcttctgccactgctgtaagggggaa
gtaagccccaaactgccggagtacatttgtcccaggtgtgaatccgggttcattgaagaa
gtcgcagatgattccagcttgctggaaagcggggccagtgctgtaaatgatgacgcagcc
atgcagttttcagagctgtggcacctgcttttcgtggagcgccccttctccctggacctg
gacagtcgggagtctgcggagaggcagcagctgagtggctcggagcactggggccccggc
aggcccacacgactccagaaccagaggagataccggagcagaggcaccacgaggcccgag
cgctcccccgcggtcgaggggattgtgcagcagttcctggccggtctctttgcaaactct
ggagttcccggctcaccgcctctctcatggacaggcatgcttcattccaatccaggggac
tatgcgtggggacagggggggctcgacgcggtcatcacacagctcctcggacagtttgag
aacacgggcccccctccagctgagaaggagaagatctgctccctgcccacagtgaccgtc
tctcaggaacaagtcgattcgaatgtggagtgccccgtgtgcaaagaggattactctctg
ggggagccggtcagacagctcccgtgcagtcacctcttccacagcgactgcatcgtgccc
tggttagagatgcacgacacgtgtccagtgtgtcgaaagagcctcagcggcgaagacgcc
acgcggcagagcctagacgcccccagcctgaacggagacgcgagaccccaggagcggtgg
tcgtcctag
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