Polyodon spathula (Mississippi paddlefish): 121306984
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Entry
121306984 CDS
T07273
Symbol
prpf3
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121306984 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121306984 (prpf3)
Spliceosome [BR:
pspa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121306984 (prpf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
ATP-synt_10
Motif
Other DBs
NCBI-GeneID:
121306984
NCBI-ProteinID:
XP_041094970
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All DBs
Position
51:541559..551472
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AA seq
691 aa
AA seq
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MSLSKRELDELKPWVEKTVKRVLGFSEPTVVTAALHCVGKGLDKRKTSDQLKPFLDESTV
KFVDKLFEAVEEGRSSRHSKSSSEKHRKRDLKEVFGDDPEISREPTAGGGPRKSSLPRFE
EVXRGREVLPAPPSESPGMLTKRQIKQMMEAATRQIEERKKQLSFVAPVPLPPRVPAVQP
EAPTRGQSIAPSQAATFMNDAIEKAKKAAELQARIQSQLAMKPGILGSLATGNTNLVALA
NLHAMGIALPKVESRDVSKPSPLILDELGRTVDASGKEIELTHRMPTLKANIRAVKREQF
KQQLRERPSEELESTAYFDPRVPALPAQRARRGFKFNEKGRFEKIAQRIRTKAQLEKLQT
EIAQAAKKTGIQASTRLALITPKKELMEGEVPELEWWDSYIFPAGMEPKPENLSNENELF
GITNLVEHPAQMSPPVGSGAPVALGVLLTKKEQKKLRRQTRREGQKELQEKVRLGLMPPP
EPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTTEQRKEKKAKK
LREDLSHGVHIAVYRIRNLTDPAKKFKVEANAGQLYLTGTVVLRRDVNVVVVEGGPKAQK
KFKRLMLHRIKWDEQRNSKRGDPDGSDDEAAKKPNKCCLVWEGTAKDRSFGDIKFKQCPT
ENMAREHFKKHGAEHYWDLALSESVLESTED
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcgaagagggagctggacgagctcaagccgtgggttgagaagacggtgaag
cgagtcctgggcttctctgagcccaccgtggtcacggccgccctgcactgcgtgggcaag
gggctggacaagcgcaagaccagcgaccagctgaagccgttcctggacgagtcgacggtg
aagttcgtggacaagctgtttgaggcggtggaggaggggaggagctcccgccactccaaa
tccagcagcgagaaacaccggaagagagacctgaaggaggtgtttggggatgaccctgag
atttcccgtgagcccacggcgggtggggggccccggaagagctctctgccccgcttcgag
gaggtgnngcgggggcgggaggtcctgccagcgcccccctcggagagcccgggcatgctc
accaaaaggcagatcaagcagatgatggaagccgccacacgacagatcgaggagcgcaag
aagcagctcagcttcgtggctcccgtcccgctgcctccgagggtccctgctgttcagcca
gaggcccccactagggggcagtccatcgctccctctcaggccgccaccttcatgaacgac
gccatcgagaaggccaagaaggcggcagagctgcaggcgcgcatccaatcacagctcgcc
atgaagccgggcattctgggaagcctggccaccggcaacaccaacctggtggcactggct
aacctccacgccatgggcatcgcactgccgaaggtggagtcccgggacgtgtcgaagccc
tctcccctcattctggacgagctggggcgcacggtggacgccagcgggaaggagattgag
ctcactcatcgcatgcccaccctgaaggccaacatccgcgcggtgaagcgggagcagttc
aagcagcagctgcgggagcgcccctccgaggagctggagtccaccgcctacttcgacccg
cgcgtgcccgccctccccgcgcagagagcccgccgcgggtttaaattcaacgagaagggc
cgcttcgagaagatcgcgcagcgcattcgcaccaaggcccagctagagaagctgcagacg
gagatcgctcaggctgctaagaagacagggatccaggcctccaccaggctggctctcatc
acccccaagaaggagctgatggagggggaggtgcctgagctggagtggtgggactcgtac
atcttcccagcaggcatggagccgaaacctgagaacctgtctaatgaaaacgaactcttt
gggataaccaatctggtggagcatcctgcacagatgagccctccagtgggctcaggcgcg
ccggtggctctgggcgtgctcctcaccaagaaggagcagaagaagttgaggaggcagacc
cggcgcgaggggcagaaggagctgcaggagaaagtgaggctgggactgatgcccccccca
gagcccaaagtacggatctccaatctgatgcgagtgctgggaacggaggctgtccaggac
cccacgaaagtggaggcgcacgtccgagcacagatggcaaagaggcagaaagctcacgaa
gaggcgaatgcagctcgcaaactgaccacagagcagcgcaaagagaagaaagcgaagaag
ctgagagaggacttgagccatggagtgcatatagcagtgtacagaatcagaaacttgacg
gaccccgctaagaagtttaaagtggaagccaatgctgggcagctctacctgacgggcacg
gtggttctgcgcagggatgtgaacgtcgtcgtggtcgagggaggtcccaaagcacagaag
aagttcaagcggttgatgcttcacaggattaagtgggatgaacagaggaactccaagcgc
ggcgaccctgacggttcagacgatgaagctgccaagaagccgaacaagtgctgcctggtg
tgggagggcaccgcgaaggacagaagcttcggggatatcaaattcaaacagtgcccgacg
gagaacatggccagggaacatttcaaaaagcacggcgcggagcactactgggacctggca
ctgagcgagtcggttctggagtccactgaggactga
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