Polyodon spathula (Mississippi paddlefish): 121306997
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Entry
121306997 CDS
T07273
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00900
Terpenoid backbone biosynthesis
pspa01100
Metabolic pathways
Module
pspa_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121306997 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pspa01006
]
121306997 (fdps)
Enzymes [BR:
pspa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
121306997 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
121306997 (fdps)
Prenyltransferases [BR:
pspa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
121306997 (fdps)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NNH1
GvpG
Motif
Other DBs
NCBI-GeneID:
121306997
NCBI-ProteinID:
XP_041094989
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All DBs
Position
51:complement(158742..165330)
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AA seq
357 aa
AA seq
DB search
MGDLADSADRKQQGTLDEREFDRQFEEIVKELTEPDLNHPEIGDAIRRLREVLEYNAPGG
KRNRGLSVIASFRELSLPQTPDAESLQRALVVGWCIELLQAFFLVADDIMDASVTRRGQP
CWYKRDGVGLDAVNDSFLLEAVIYRLLKRYCRAQPCYLNLIELFLETSYQTELGQALDLM
TAQPDRIDLTRFTEERYKAIVKYKTAFYSFYLPVAAAMYLAGIDSEEQHSNAKAILLEMG
EFFQIQDDFLDCFGDPAVTGKIGTDIEDNKCSWLVVETLKRASPEQRRVLEESYGRHDPG
SVSRVKSLYAELGMPALFQEHEERSYQHLHELIQRHANTLPHAVFLSFAQKIYKRNK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttggctgacagtgcagacaggaagcagcaggggactctggatgagcgagag
ttcgaccgccagtttgaggagatcgtgaaggagctgactgagcccgacctgaaccacccg
gagatcggggacgccatccgcaggctgagagaggtgctggagtacaacgcccccgggggg
aagcggaaccgcggcctgtcagtcatcgcctcgttcagagagctgtccctcccgcagacc
cccgacgcggagagcctgcagcgcgccctggtggtgggatggtgcattgagctgctgcag
gccttctttctggtggccgatgacatcatggatgcctcagtgaccaggagggggcagcct
tgctggtacaagcgggatggggtagggctggatgccgtcaatgactccttcctgttggag
gctgtgatctacagactgctgaagagatactgcagagcccagccctgctacctgaacctc
atcgagctctttctggagacctcctatcagactgagctgggccaggcgctggatctgatg
accgcccagccggaccggatcgacctgacccggttcactgaggagaggtacaaagcgatt
gtgaagtacaagactgctttctactccttctacctgccggttgctgctgccatgtatctg
gctggtattgacagtgaggagcagcacagcaatgccaaggcaatcctgctggagatggga
gagttcttccagatacaggatgatttcctggattgcttcggcgaccccgcggtgacggga
aagattgggacggacatcgaggacaacaagtgcagctggctggtggtggagacgctgaag
agagcgagcccagagcagaggagggttctggaggagagctacggacggcatgacccgggc
agtgtgtcccgtgtgaagtctctgtacgcggagctgggaatgccggcgctgttccaggag
cacgaggagaggagctaccagcatctgcatgagctcatccagcgccacgccaacaccctc
ccccacgccgtcttcctgtccttcgcacagaagatctacaagaggaacaagtga
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