Polyodon spathula (Mississippi paddlefish): 121307003
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Entry
121307003 CDS
T07273
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121307003
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121307003
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121307003
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
121307003
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121307003
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121307003
Prokaryotic type
121307003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Flavodoxin_1
Motif
Other DBs
NCBI-GeneID:
121307003
NCBI-ProteinID:
XP_041094998
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All DBs
Position
51:complement(373930..387016)
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AA seq
699 aa
AA seq
DB search
MIPAVRALGGAAALSCRSYGQVPLPSLVSERLALFLQLQSQRSAQLEERAQRDSKPIRVS
LPDGRELHAQAWKTSPLELAARLGRSLVDGAVVARVNGVLWDLGRPLEQDGTLEILGFDS
TEGKGVFWHSSAHVLGSAMESLYRGSLCHGPSTDSGFFYDMHLDSSSLSNNDLPALQDLC
TRIIRERRPFERLEVTRGELLELFKHNKFKLQIIEEKITTQTATVYRCGSLVDLCRGPHL
PHTGKIKAFKLLKSSSAQWRGDPSMQPLHRVIGVSFPESRLLRDWEQEREEARRRDHRRI
GRDQELYFFHELSPGSCFFLPKGAHLYNTLTDFIKSEYRQRGYTEVVTPNIFSSRLWERS
GHWQHYRDSMFSFRVETDTFALKPMNCPGHCLLFEHRPRSWRELPLRLADFGVLHRNENS
GALTGLTRVRRFIQDDAHIFCTPQQLHSEMRGCLQFLQAVYSVLGFSFRLFLSTRPDKFM
GDPEVWDHAEEQLQSSLEEFGEPWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQ
LPIRFDLRYVSQEGESERPVMIHRAILGSVERMIAILAENYAGKWPFWLSPSQVMVIPVG
GSTEHYAQEVHRQFQQAGFMVEVDLDRGATLNKKIRSAQLAQYNFILVVGEKEQSRGSVS
VRTRDGRQLGERGVNETMDRLRELREKRRGVGVEEEEGF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgcagtgagagcgctcggcggggcggctgcgctgagctgcaggtcttacggg
caggtccctctgccctcgctggtctctgagaggctggctctgttcctgcagctccagtcc
cagcgctctgcccagctggaggagagggctcagagggacagcaagcccatccgggtctcc
ctgcccgacggcagagagctccacgcacaggcctggaaaaccagcccactggagctggca
gcgaggctcggtcgcagtctagttgacggggccgtggttgctcgggtgaacggggtgctc
tgggatttggggagacccctggaacaggacggcaccctggagatcctggggttcgacagc
actgaaggaaaaggggtgttctggcactccagcgctcatgttctgggctcagcgatggag
agtttgtatcgggggtctctctgccatggccccagcactgacagcggcttcttctacgac
atgcacctggactccagctcgctgtccaacaatgacctcccagcactgcaagatctgtgc
actcggataatccgagagagacggccgttcgagaggctggaagtgaccaggggggagctg
ctggagctgttcaagcacaacaaattcaagttgcagattatcgaggagaagataacgaca
cagacggctactgtttacaggtgtggctctctggtggacctgtgcaggggaccccatctc
cctcacactgggaaaatcaaggcattcaaactgctcaagtcctcctcggcgcagtggcga
ggggacccctctatgcagcctctccaccgggtgatcggggtctccttcccggagagccgg
ctcctgagagactgggagcaggagcgggaggaggcgaggaggagggaccaccgacgcatc
ggcagggatcaggagctctattttttccacgagttgagtccagggagctgtttcttcctg
cctaagggagctcacctctacaacacgctcaccgacttcatcaagagcgagtacaggcag
aggggatacacggaggtggtgacccccaatatcttcagctctcgtctgtgggagcgctca
gggcattggcagcactacagagacagcatgttctccttccgggtcgagacggacaccttc
gccctcaaacccatgaactgccccggccactgtctgctgtttgagcatcgccctcgctcc
tggagggagctgcctctgcgcctcgctgatttcggggtgctgcatcggaatgagaactcg
ggggcgctgaccggactcacccgggttcgcaggttcatccaggacgacgcccacatcttc
tgcaccccccagcagctccactctgagatgagggggtgtctgcagttcctgcaggctgtc
tactccgtgctggggttctcgttccgcctctttctctctacgcgccctgacaaatttatg
ggggaccccgaggtgtgggaccatgctgaggagcagctgcagagcagcctggaggagttt
ggggagccctgggagctgaaccctggagacggagcgttctatggacccaagatcgatatt
cagatcaaggatgcgattggccgctaccatcagtgcgccaccatccagctggacttccag
ctaccaatcagattcgacctccgctacgtcagtcaggagggagagtccgagagaccagtc
atgattcaccgcgctatactgggatcagtggagaggatgatcgctatactggcagagaac
tacgcagggaaatggcctttctggctctctccttctcaggtgatggtaattccagtaggg
ggcagcactgagcactacgcccaggaggtgcaccggcagttccagcaggctggcttcatg
gtggaagtggacctggatcgaggagccaccttaaataagaagattcgcagcgctcagcta
gcccagtacaacttcatactggtggtgggtgagaaggagcagtctcgtggctcggtgtct
gttcgcacgcgggacggcaggcagctcggagagcgaggggttaacgagacgatggacaga
ctgagagagctgagggagaagaggagaggagtgggtgtggaggaggaggaggggttctga
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