Polyodon spathula (Mississippi paddlefish): 121307005
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Entry
121307005 CDS
T07273
Name
(RefSeq) ephrin-A1-like
KO
K05462
ephrin-A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121307005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121307005
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121307005
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121307005
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121307005
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121307005
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121307005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121307005
NCBI-ProteinID:
XP_041095002
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Position
51:complement(1246122..1249281)
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AA seq
196 aa
AA seq
DB search
MLTGLTSPPSLSSIPRFLWDDYTVSVRINDYLDIICPHYEEGAGPSRTAERYILYMVELQ
DYLTCKPQSKEQLRWECDRPHAPHGPERFSEKFQRFTPFTLGKEFKEGDTYYYISKPIHH
HGEQCLRLKVNVIGPAAPQQPRIGVVHTTKAKLPADDPAVSLPDVLRSVANNCNLPLASI
SFLLTLLPSLALLLLL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgctcacagggctaacctcgcccccctctctctcttctatccccaggttcctatgggat
gactatactgtttctgtgaggatcaacgactatctggacatcatctgcccccactacgag
gagggggcgggcccctcccgcacggccgagcgctacattctgtacatggtggagctccag
gactacctgacctgcaaaccccagtccaaggagcagctgcgctgggagtgcgaccgcccg
cacgccccccacgggccggagagattctcggagaagttccagaggttcacccccttcacc
ctgggcaaggagttcaaagagggggatacctactactacatctctaaaccgattcaccat
cacggggaacagtgtttgaggctcaaagtcaacgtgatcggaccagctgctccccaacag
cccaggattggagttgtgcacactaccaaagccaaactaccagcagacgacccagcagtc
agtctcccagatgttttgaggagcgttgcaaacaattgcaaccttcccctcgcctccatc
tccttcctgctgacactgctgccctccctagccctgctgctactgctttag
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