Polyodon spathula (Mississippi paddlefish): 121307014
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Entry
121307014 CDS
T07273
Name
(RefSeq) GA-binding protein subunit beta-1-like
KO
K09454
GA-binding protein transcription factor, beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121307014
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121307014
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121307014
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
121307014
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GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
121307014
NCBI-ProteinID:
XP_041095017
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Position
51:1017442..1023755
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AA seq
435 aa
AA seq
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MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASAGHSDIVELLIRNGADINAKDMLKMTALHWAADHGHRESA
ELLVKYGADVHGLSKFDKTPFDISADNRNTELMLLLQDGMQNQLDLNPDRSVPVSNAVTL
STPQFIFSSGGVLNLSDLVSSSTTKTTSGETTVSSTSVLATLAALAEASGPMSNSNRSGD
SEEVITVDSVDSAIQQMVSGGGQRVITIVTDQHGNLQTSGLGQQFIVTMQDGQQVLTLPA
GHITEEVVEEDQPVPAKKRRLETPLNHTALNDKHPQTGTEAHKDRLERKELQKQLHAANC
QAQEYRQQLLRKEQEAEQYRLKLEAMAQVQSNGKQEEEEEGAGLGVQEEEVVTGLPEGAI
VVKAEELEQEEEVTL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggatttgggaaagcgtttgttagaagcagctcggaaaggcgaggacgat
gaagtcagaacgctaatggcaaacggtgctcccttcacgacagactggctaggaacgtct
cccctccatctagcagctcagtatgggcactactccacagcagaggtgctgctcagggcc
ggtgtcagcagggacgcccggaccaaagtagaccggacccccttacacatggcagcgtcg
gcgggccactctgacatcgtggagctgctgatcaggaatggagcagacatcaatgccaaa
gacatgctgaagatgacagctcttcactgggcagcggatcacgggcacagggagtcggct
gagctgctggtgaagtacggggccgacgttcacgggctgagcaaattcgacaagaccccc
ttcgacatctccgctgacaaccgcaacacagagctgatgctgctgctgcaggacggaatg
cagaaccagctggacttgaacccggatcgctcggtcccggtcagcaatgccgtgaccctc
tccaccccgcagttcatcttctcgtcgggaggagtgctgaacctctccgatctcgtctcc
tcctccaccacgaagactacctcaggtgaaacgacagtctcttccacctctgtgctggca
acactagcagctctggcagaagcatcagggccaatgtcaaattcaaacagatcaggtgac
tcggaggaggtgatcacggtcgactcggtggattccgcgatacagcagatggtgagcggt
ggaggtcagcgggtcatcaccatagtaaccgaccagcacggcaacctgcagaccagcggg
ctcgggcagcagttcatagtgaccatgcaggacggacagcaagtgctaacgctcccggcc
ggtcacatcacagaggaggtggtggaggaggaccagcccgtcccggccaagaagaggaga
ctggaaacgccgctgaatcacacggcgctaaacgacaagcatcctcagactgggacagaa
gcccataaagaccgcctggagaggaaggagcttcagaagcagctccatgcagcgaactgc
caggcgcaggagtaccgacagcagctcctgaggaaggagcaggaggctgaacagtaccgg
ctcaaactggaggccatggcccaggtgcagagcaatgggaaacaggaggaggaggaggag
ggagcggggctaggggtgcaggaggaggaagtggtcactggcctccccgagggggccatc
gtcgtcaaagcagaggagctggaacaggaagaggaagtgacgctttag
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