Polyodon spathula (Mississippi paddlefish): 121307054
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Entry
121307054 CDS
T07273
Name
(RefSeq) LIM/homeobox protein Lhx3-like isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121307054
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
121307054
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
HAM1_C
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
121307054
NCBI-ProteinID:
XP_041095080
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Position
52:complement(969310..988271)
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AA seq
403 aa
AA seq
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MDSLIQCNASSEAPSTDMLLALLAQNEELRKEIPMCAGCNQHIVDRFILKVLDRHWHSKC
LKCSDCHTQLEDKCFSRGESVYCKEDFFKRFGTKCASCQQGIPPTQVVRRAQDFVYHLHC
FACVVCKRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTITAKQLETLKTA
YNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSR
GSSKSDKDSIQEEGLDSDAEVSFTDEPSLPEISHSNGIYSTLSEASPALARQAGSHGAFP
MEHGVIPAQNQYHDIRSSSPYGMPQSPSSLQAIPGHQPLISSLAYPNSGLAIMAQSAQGM
TQAMRVLGGNGPSSDLSTGSSGGYPDFPASPASWLDEVDHTQF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggattctcttatccagtgtaacgcatccagtgaagctcccagtacggatatgctgctt
gccctgttagctcagaacgaagagctacgcaaagagatccctatgtgcgcaggctgtaac
cagcacatcgtggaccggttcattctcaaagtgctggacagacactggcacagcaagtgt
ttgaaatgcagcgactgccatacccaactggaagacaagtgcttcagcagaggcgagagc
gtctattgcaaggaggacttcttcaagaggtttgggactaaatgcgcctcctgtcagcaa
ggtattccgcctacacaagtggtcagaagggcccaggacttcgtttaccatcttcactgc
ttcgcctgtgtcgtgtgcaagcggcaactagcaacgggagacgagtattacctaatggag
gacagccgtctcgtgtgcaaggctgactatgagaccgccaaacaaagagaggcagactcc
actgcgaaacgaccccggaccaccatcacagccaaacagctagaaacgctgaaaaccgcc
tacaataactcccccaagccagcccgacatgtcagagaacagctatcttcggagaccggg
ctggacatgagagtagtgcaggtttggttccagaacagacgagccaaagagaagaggtta
aaaaaagatgcaggcaggcagcggtggggccagtacttccgcaacatgaagaggtcccgg
gggagctccaagtcagacaaggacagcattcaggaggaggggctggacagtgatgctgag
gtctccttcacagatgagccatctttgccagagataagtcactccaatgggatatacagc
accctgagtgaggcctccccagccttggccagacaagcagggagccatggtgccttccca
atggagcatggtgtgatcccagcccagaaccagtaccatgacatccgttccagcagtccc
tatggcatgccccaatccccaagctcgctgcaggcaattcctggacaccagccactcatc
tctagcctggcctacccaaactctgggctggccattatggcccagagtgcacagggaatg
acccaggccatgcgagtgttgggcggaaatggacccagttcagatttgtccaccgggagc
agcggggggtatccagatttccccgccagccctgcctcatggctagatgaagtggaccac
acccaattttga
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