Polyodon spathula (Mississippi paddlefish): 121307126
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Entry
121307126 CDS
T07273
Name
(RefSeq) integrin alpha-7-like
KO
K06583
integrin alpha 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
pspa04810
Regulation of actin cytoskeleton
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121307126
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121307126
09142 Cell motility
04820 Cytoskeleton in muscle cells
121307126
04810 Regulation of actin cytoskeleton
121307126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121307126
04515 Cell adhesion molecules [BR:
pspa04515
]
121307126
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121307126
Cell adhesion molecules [BR:
pspa04515
]
Integrins
Integrin alpha subunits
121307126
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Band_7
Motif
Other DBs
NCBI-GeneID:
121307126
NCBI-ProteinID:
XP_041095188
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All DBs
Position
53:1553449..1589630
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AA seq
609 aa
AA seq
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MWLCALNCVVSCQPKPSLRRRHSANCALPPRNPLVTVDNDIAWIQTCDLQAIGCTLHSTR
SAFTGCTTQEMRMQGHRCAAENAGSQVCCGECRVTGVLRRMLGHRCAVENAGSQVCCGEC
RVTGVLWRMQGHRCAVENAGSQVCCGECWVTGVLRRMLGHRCAVENAGSQVCCGECWVTG
VLWRMLGHRCDVENAGSQVCCGECRVTDIAIGAPFDGDGKVYIYHGSASGINIKPAQVLD
GEGVGVKRFGYSLSGGMDIDGNSYPDLVVGSLSDSVVLYRARPVIHVLREISVQPQNIDL
EQKNCRGRDGVCVEVKVCFIYTAQPKTYNPRITLSVMFEADSERRKLGLPHRVNFLGRKS
SEPEYQRSEEVELRGQHARACQSTIFQLQDSLRDKLSPISVSASYSIKQARHSNQPTNKL
GAMSPVLNAAMPSTLRTEVNFLREGCGEDKICQSNLQLSHRFGTRGTNTDLFTPLPVDME
GMPVFSLSDQKTVALEVTVTNLPSDPKQPQKDGDDAHAAQLLVGMPETLSYSGFRGPQDK
QLVCAANANGSYAECELGNPMKRNGKVTFYIILSTSAITIETTDLAVNLQLLTISEQPDL
LPIVAEQES
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgtgtgcgctgaactgtgttgtgtcctgccaacctaagccctccctacgcagg
cggcattcggccaattgtgcgctgccccctaggaacccccttgtcacggtcgacaatgac
atagcctggattcaaacctgcgacctccaggcaataggatgcacgctgcattccacgcgg
agcgcctttactggatgcaccactcaggagatgagaatgcagggtcacaggtgtgctgcg
gagaatgcagggtcacaggtgtgctgcggagaatgcagggtcacaggtgtgctgcggaga
atgctgggtcacaggtgtgctgtggagaatgctgggtcacaggtgtgctgtggagaatgc
agggtcacaggtgtgctgtggagaatgcagggtcacaggtgtgctgtggagaatgctggg
tcacaggtgtgctgcggagaatgctgggtcacaggtgtgctgcggagaatgctgggtcac
aggtgtgctgtggagaatgctgggtcacaggtgtgctgtggagaatgctgggtcacaggt
gtgctgtggagaatgctgggtcacaggtgtgatgtggagaatgcagggtcacaggtgtgc
tgtggagaatgcagggtcacagatattgccataggagccccattcgatggcgatggcaag
gtctacatctaccacggcagtgcttctgggatcaacatcaaacctgcacaggttctggac
ggggaaggggtgggggtgaaacgcttcggctactctctctcaggggggatggatattgac
gggaactcctaccctgatctggtggtggggtcactgtctgactctgtcgtactctacagg
gctcgtcctgtcattcatgtcttgagagaaatctctgtgcagccccaaaacattgatctg
gagcagaagaactgtcgcggtcgggatggtgtctgtgttgaagtgaaggtctgcttcata
tatactgcacagcccaagacatacaacccccgaatcactctcagtgtgatgtttgaggca
gactcagaacgcaggaagttgggtctgccacaccgagtcaacttccttgggcgtaaaagc
tcagagccagagtaccagcgctccgaagaggtggagctgagaggccagcacgcccgtgca
tgtcagagcactatctttcagttgcaggatagtctacgtgacaagctcagcccaatctct
gtctcagcaagttactccatcaagcaggcacgacactcaaatcagcctaccaacaagcta
ggggcgatgtctccggtgcttaacgctgccatgcctagtaccctgcgcactgaggtgaac
ttcctgcgagagggctgtggggaggataagatctgtcagagtaacctgcagctgagccat
cgcttcggaacccgtggcacgaatactgacctcttcacaccactacctgttgacatggaa
ggcatgcctgtcttctcactcagtgaccaaaagactgtggctctagaggtcactgtcacc
aacctgccctctgaccccaagcaaccccagaaggatggggacgatgcccacgctgctcaa
ctcctggtgggcatgcccgagaccctgtcctacagcggcttccgaggaccccaggataaa
cagttagtctgtgcagcaaatgcgaatggctcttatgcagaatgcgagctggggaatcca
atgaagagaaacggcaaggtcaccttctatataattctgagcacatccgctatcaccata
gaaaccactgacctagcagtcaatctgcaactgctcacgatcagtgagcagcctgacctg
ctgccaattgtggctgagcaagagtcgtga
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