Polyodon spathula (Mississippi paddlefish): 121307163
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Entry
121307163 CDS
T07273
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04210
Apoptosis
pspa04517
IgSF CAM signaling
pspa04530
Tight junction
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121307163
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121307163
09143 Cell growth and death
04210 Apoptosis
121307163
09144 Cellular community - eukaryotes
04530 Tight junction
121307163
04540 Gap junction
121307163
09142 Cell motility
04814 Motor proteins
121307163
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121307163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121307163
03036 Chromosome and associated proteins [BR:
pspa03036
]
121307163
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121307163
04147 Exosome [BR:
pspa04147
]
121307163
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121307163
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121307163
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121307163
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121307163
Exosomal proteins of other body fluids (saliva and urine)
121307163
Exosomal proteins of colorectal cancer cells
121307163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121307163
NCBI-ProteinID:
XP_041095233
LinkDB
All DBs
Position
53:complement(998349..1001702)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGAQIGNACWELYCLEHGIQPDGTMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctccatccacgttggccaggctggtgcgcagattggcaatgcctgc
tgggagctctactgcctggagcacggcatccagcctgacgggacgatgcccagtgacaag
accattggaggaggggacgactccttcaacaccttcttcagtgagactggagccggcaag
cacgtccccagagctgtctttgtagacctcgagccaacagtcatagatgaggtgcgcact
ggtacctaccgccagctgttccaccctgagcagctcatcactggcaaggaggacgctgct
aacaactacgcccgtgggcactacaccatcggcaaggagatcatcgacctggttctggac
agggtccgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tttggaggtggtacgggttctggtttcacctccctgctgatggaacgcctgtctgtggac
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtctccacagct
gtggtggagccgtacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagacaatgaggccatctatgacatctgccgcaggaaccttgatattgag
cgcccctcctacaccaacctgaacaggcttatcagccagattgtgtcctccatcacagcc
tccctccgattcgacggtgccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctacgccccagtcatctcagccgagaaa
gcctaccatgagcagctttctgtgtctgagatcaccaacgcctgctttgagccggccaac
cagatggtcaaatgtgacccccgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgacgtggtgcccaaagatgtcaacgctgctattgccaccatcaagaccaagcgtagc
atccagtttgtggactggtgcccaactggtttcaaggttggtatcaactaccagcctccc
actgtggttcctgggggcgacctggccaaggttcagagggcagtgtgtatgctgagcaat
accaccgccatcgctgaggcctgggcccggctggaccacaagtttgacctgatgtatgcc
aagcgggccttcgtccactggtacgtgggggagggtatggaggaaggagagttctcggag
gcccgtgaggacatggctgccctggagaaagactatgaagaggtgggcgtcgactccatt
gagggagagggagaggaggaaggagaggagtattaa
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