Polyodon spathula (Mississippi paddlefish): 121307170
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Entry
121307170 CDS
T07273
Symbol
hoxc6a
Name
(RefSeq) homeobox protein Hox-C6a
KO
K09306
homeobox protein HoxA/B/C6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121307170 (hoxc6a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121307170 (hoxc6a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121307170
NCBI-ProteinID:
XP_041095243
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All DBs
Position
53:340736..342993
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AA seq
235 aa
AA seq
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MNSYFTNPSLSCHLGSAGQDVLPNVALNTAAYDPVRHFSYGAAVAQNRIYSSPFYSPQEN
VVFGSSRGPYEYGSNVFYQDKDILPSCRQSAMGHTSQPSIVQDYSTDPSRTAGQDQKGGS
VQIYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALC
LTERQIKIWFQNRRMKWKKESNQNSVLPGGTEHGPGPETQEEEKQEEAEEEKQKE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctatttcactaacccgtcgctctcctgccatttaggaagcgcagggcaagac
gttttacccaacgtagccctgaacacagccgcctatgaccctgtgaggcacttctcgtac
ggtgcagccgtggcgcagaatcggatatactcgtcccctttctactcgccccaagaaaac
gttgtgttcggctccagccgtgggccttacgaatatggatctaatgtgttttaccaagac
aaagatatccttccgagctgcaggcaatcggctatgggccacacttcacagccctccata
gtgcaggactacagcactgacccgagcaggactgcggggcaggaccagaagggaggcagt
gtgcagatatacccgtggatgcagagaatgaactcacacagtggggttgggtacggttca
gatagacggaggggtcgccagatttattcgcggtatcagactttagagctggagaaagaa
ttccatttcaaccgctacctgacccgccgcagacgtatcgagatcgccaacgcgctctgt
ctaaccgaacgccagatcaaaatctggttccagaaccggcggatgaaatggaagaaggaa
agcaatcagaactccgttctgcccggcggtacagaacacggacccggtccggaaacccaa
gaagaagaaaaacaagaagaggctgaggaagaaaaacagaaagagtaa
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