Polyodon spathula (Mississippi paddlefish): 121307211
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Entry
121307211 CDS
T07273
Name
(RefSeq) catenin delta-1-like isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121307211
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
121307211
NCBI-ProteinID:
XP_041095280
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Position
54:complement(809406..834219)
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AA seq
989 aa
AA seq
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MEDPDVDCTASLLASVREQEVQFERLTRALEEERRGTQRGTLTREQQNGRVPGDAGFERQ
KVYLNGSQPQQYSTLTRMLDPGHFVEETVTMEEDPDPPASVVSVETSDDGTTRRTETTVK
KVVKTVTTRTVIPSVSVSDALSLDGSIQGGNGFSGGSMQGGGGTGNGGGYTATLERMYRG
GGTPTPAPPGGNMYVGPPGTATVPRNYHYADSAGGYPRGGGGYGETNSYRPGPPSEAYAS
LSRMQRMDDRYRPAEGYRTLDAGYRAPSRQADPYAAQPQVRMGSNLELSRGGHPERFVHE
PYGLEDDQRSLGYEDLDYGLAPGLGGSRDYPSMTLRSTGGTLDPRRRLRSYEDTLDSDMG
GGDPYYWSSNAPLAQAERGSMASLDSTLRKGGAPQNWRQPELPEVIAMLNYRLDPVKSNA
AAFLQHLTFQNDKMKSDVRRLKGIPALVGLLDHPKKDVHYSACGALKNISFGREGDNKVA
IKNCDGVPALVRLLRKARDQDLTDCITGTLWNLSSHDSVKMEIVDHALHALSDEVMVPRS
GWEREQNEDSKPRHIEWETALTNTAGCLRNVSSERSEARRKLRECSGLVDALMYIVQSQI
NRQDVDNKLVENCVCLLRNLSYQVHKEVPGHERYQENNALLGQSSNTNGTQRASCFGSKK
GKDVWFAEGKSNTEDYSTEVIDIPKRSAPAKGYELLFQPEVVRLYTSLLKESKNPAVLEA
AAGSLQNLCAGRWTYGRYIRAMVRQEKGLSSIAELLEHPQDRVVRGVSGALRNLAIDGRN
RELIGKHAMANLVRNLPGGQQQPAKNLSEETTVCLLSTMNEVLLNNLEAAKKLREAQGIE
KLVLINKDGNRTDKEVRGAGLVLQTVWGFKELRKPLEKEGWKKTDFMVNLNPAPRSQGYE
DSTLPLMDRRAGEKGDREMIPMNDLGPEAYSTLDQRDRNRSIDLSESDHMQRGLLGGSSG
SVAHLVDSYDEKLIIFISQRDLSIQAHCR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctgacgtggattgcacagccagcctgctggcctctgtgcgtgagcaggag
gtgcagtttgagaggctgacccgtgcgctcgaggaagagagacgcggcactcagagaggg
acgctcacacgcgagcaacagaacgggagggtacctggcgatgctgggttcgagagacag
aaagtctatctgaacggatcgcagccacagcagtacagcactctgaccaggatgttggac
ccgggccacttcgtggaggagacggtcacgatggaggaggatcccgacccaccggcctcc
gtcgtttccgtggaaacgtcggacgacgggaccacgcgcaggacggagaccacggtgaag
aaggtcgtaaagacagtcacgactcgcactgtgatcccctctgtgtcggtctcagacgcc
ctctccctggacggctcgatccaggggggcaacggcttctccgggggctccatgcagggc
ggggggggcacggggaacggtgggggctacacggccacgctggagcgcatgtaccgggga
ggagggacccccactcccgccccgcctgggggaaacatgtacgtgggacccccgggcacc
gccaccgtaccccgaaactaccactacgcagactccgcagggggttacccgcggggaggg
gggggctacggggaaaccaacagctaccggcccggccccccctcggaggcctacgccagc
ctctcgagaatgcagcgcatggatgacagatacaggcccgcggaggggtaccgcactctg
gatgcggggtaccgggcccccagcaggcaggccgacccgtacgcagcccagccgcaggtg
cgcatggggagcaacctggagctgagccgaggggggcaccccgaaagattcgtccacgag
ccctacgggctggaggatgaccagaggagtctgggatacgaggacctggactacggcctg
gcccctggcctggggggctcccgggactaccccagcatgacgctgaggagcacagggggc
acgctggaccctcgccgcaggctcaggagctatgaggacaccttggacagtgacatgggt
ggaggggacccctattactggagcagcaacgcccctctggcccaggcggagcggggcagc
atggccagtctggacagcacgctgcggaagggtggggcgccccaaaactggaggcagccg
gagctccccgaagtgattgccatgctgaactatcgactggaccccgtgaaatccaacgca
gccgccttcctacagcacctcaccttccagaacgacaagatgaaatctgacgtccgtcgt
ttgaaggggatccctgctctggtcggcctcctggatcaccccaaaaaagacgtgcactac
agcgcctgcggggccctgaaaaacatatccttcgggcgggagggagataacaaggtggcg
atcaagaactgcgacggggtgccggccctcgtgagactgttgaggaaagcgagagaccag
gacctcactgactgcatcacaggcaccctgtggaacctctcctctcacgactctgtgaag
atggagatcgtggatcacgcgctgcacgctctctctgacgaggtcatggtgccgcggtcg
gggtgggagagggagcagaacgaagattccaagcccagacacatagagtgggagacggcc
ctcaccaacactgcaggctgtctgaggaatgtgagttcggagcgcagcgaggcgcgcagg
aagctgagggagtgcagcgggctggtggatgcgctcatgtacatcgtgcagtcacagatc
aaccgccaggacgtagacaacaagctggtcgagaactgcgtgtgtctgctccgaaacctg
tcctatcaggtacacaaggaggtcccaggacacgagcgctaccaggagaacaacgcgctt
ctcggccaatcctcgaacaccaacgggacccagcgagccagctgcttcggcagcaagaag
ggcaaagacgtgtggtttgctgaaggaaagagtaacactgaggattacagcacagaagtc
attgatattccaaaacgctccgcaccggcaaaagggtatgagctgctgttccagcctgag
gtcgtgcgcttgtacacgtctctgctgaaagagtcgaaaaaccctgcggtgctggaggcc
gctgctggatctctgcagaacctgtgtgcggggaggtggacgtatgggaggtatatccgc
gcgatggtgcgtcaggagaaagggctgtcgagcattgcggagctgctggagcacccccag
gacagggtggtgaggggggtgtcgggggctctgaggaacctggccatcgacgggaggaac
agagagctcatagggaagcacgcgatggccaatttagtgcggaaccttccaggagggcag
cagcagccagcgaagaacctgagtgaggaaacgaccgtgtgtctgctgagcaccatgaac
gaggtccttctcaacaacctggaggcagccaagaaactgagagaggcgcagggaatcgag
aaactggtgctgatcaacaaggacggcaatcgcacagacaaggaggttcggggcgcgggc
ctcgtgctgcagactgtttgggggttcaaggagctgcgcaagcccctggagaaggagggg
tggaagaaaacggacttcatggtgaatctgaaccccgccccccggagtcaggggtatgag
gacagcacgctgcccctcatggaccggagagcaggtgagaagggagaccgagaaatgatt
cccatgaacgacttgggcccagaggcttattccactctggaccagcgagaccggaaccgg
tccattgacttgtcagaaagcgaccacatgcagaggggtttgctcggaggcagtagtggt
tctgtggctcacctggttgactcttatgatgaaaaactaataatctttatctcgcagaga
gatttatcaatccaagcccactgccgctag
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