KEGG   Polyodon spathula (Mississippi paddlefish): 121307344
Entry
121307344         CDS       T07273                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121307344
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121307344
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 121307344
NCBI-ProteinID: XP_041095455
LinkDB
Position
55:377513..406460
AA seq 1091 aa
MLKQQLSVGGRKAPNGTVPTAGSTSSASPGGSSRSAAGRGRNSGKGPPQSSPVFEGVYNN
SRMLHFLTAVVGSTCDIRVKNGNIYEGIFKTLSSKCELAVDAVHKKPPEQVSPGGVGVPP
KREDIVDTMIFKPADVVTMQFKNVDLNYAAKDKFTDSAISGSKVNGEHKEKVLQRWEGGD
SNGESYDLESDAANGWDPNEMFRYNEENYGIKSTYDSSLSLYTVPLEKGTSEQFRQREAR
AAKLASEIESSPQYRQRVSVENDEGRSEEDKYSSVVRERDRDRDSPRDRDRDSPSLSSSR
EGKYTPLPQRARESGVVRGCLRGSSGGGSQSLRGALGSRTVGSMSTLPPRSGSAHPSTDS
SGQSQPRGGSSLTETSLATRGSYSGHHLHHASGFQSHHAEPRGSLHPPSTDMATSPSLHG
SAVESGGASPLSVAGGTSGLPPLSVATQALPRAITEPMAPQSTGQPQSNQLSTGSSAGSP
AGQEQQRVLNGGASRMSPKSQRIASRTIKPTPSPTGTATSAGVARASFPPRSLKSGSTQD
SPLTPPYLDNTPVSTVTSKPFGPSPTPTFNVDVNEIISSGVKDRTLDSPGNGIDTTKPCV
KAPTEHHRNQLEELRKFGKEFRLQSSGGAVDPEPVSKDVGSGSADPNQQRDSSGSSVESL
PVQAVDQRQQSGLSEPQAESSADRQSPGTPAAARTPSESEERPEGLPDQVKKSTLNPNAK
EFNPNKSVLPVSKQTSTPTPPRPQTLPSPSITVLPPQNQGGIYNTPYISNVYQFHMGPAV
QGHQMYQYTVSAVSQGKYQRAKGSVGPQRSDQHHTASAPPMMQAATAAGPPLVAASPYPS
SYIQYPQQYPGQQAVMQAIQHYQSQPMYPMLQGGNPRMMTSGGHPQTLVSSSTPQYPSAD
QGPPQAMYATVPQPYPHHSTPLHPHQPQPATTPTGNQQGSQHPAPSPVQHQPGLGSGQPP
QQGLYHTGALTPTPPSITPGPNSQSPQSGYSQQQVYAIHTQLQHGYPGLGQLAQAHVQGA
LSQGHPHPHPTGSHGHPQVMLIHAPPQQGHGAPPNHPGQGGQQSGTHYTYMHQVPVQPVP
TQQLSFHPPGN
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgttgaagcaacagctgagtgttggaggccgaaaagcccctaacgggaccgtccccacg
gcggggtcgacctcgtccgccagccccgggggcagcagcaggtcggccgctggaaggggc
agaaactctggcaagggacctccacagtcctctccagtctttgagggagtttataataac
tccagaatgctgcactttcttactgctgtagtgggttccacgtgtgatatcagagtgaag
aacggaaacatttacgaggggatatttaaaaccctcagctccaagtgtgagctggcagtg
gatgctgttcacaagaagccccccgagcaggtctctccgggaggggtgggggtgcccccc
aagagggaggacatcgtggacaccatgatcttcaaacccgcagatgttgtcaccatgcag
ttcaaaaacgtggacctgaactacgcagcaaaagacaagttcacagactcggcgatcagc
ggctccaaagtgaacggggagcacaaagaaaaggtgcttcagcgctgggagggaggagac
agcaacggagagagctacgacctggagagtgacgcggcgaatggctgggatcccaacgag
atgtttcgctacaacgaggagaactacggcatcaagtccacctacgactctagcctgtct
ctctacactgttcctctggagaagggcacctcggagcagttcagacagagggaagcccgc
gctgcgaagctggccagtgagatagagtccagccctcagtacagacagagggtttcagtg
gagaacgacgagggccgctcagaggaagacaagtacagctctgtggtgcgggagagagac
cgagatagggacagtcccagggacagggacagagacagccccagcctcagcagtagcagg
gaaggcaagtacacccccctgcctcagcgggcccgcgagagtggggttgtgagggggtgt
ctaaggggctcctctggggggggctcccagtccctgaggggggctctgggcagcaggact
gtgggcagcatgtctaccctgccccccaggtcaggctctgctcacccctccactgacagc
agtggccagtcccagccacgtgggggctcctccctgacagagaccagcctggccacacgt
ggatcctactctggccaccatctccaccacgcctccggcttccaatcccaccatgctgag
ccacgagggtccttgcaccccccttccacggacatggccacgagccccagccttcatggc
tctgctgtagaaagtggtggtgcttcccctctctcggtggctggaggtacttcaggcctg
ccccctctatctgttgccacgcaagctctgccacgagccatcacagagcccatggccccc
cagtccacgggacagccacaaagcaaccagctctctactgggagcagtgcaggcagcccg
gcaggacaggagcagcagagagtgctgaatggaggtgcatcacgcatgtctcccaaaagc
cagagaattgccagtagaaccatcaaacctacccccagccccacaggaaccgccaccagc
gcaggtgtggctcgtgcctcctttcctccccgttccctcaagtctggctccacccaggat
tcacctttgacccctccctaccttgacaacacccccgtctccacagtgaccagcaagccc
tttggcccctcccccacccccaccttcaatgttgacgttaatgagattatcagttctgga
gtaaaagacagaactctggacagtcctggaaatggcattgacaccacgaagccctgcgtg
aaagcccccacggaacaccatcggaaccagttggaggagctgaggaaattcggtaaagag
ttccggttgcaatccagtggtggtgctgtggatcccgagcctgtttcaaaggacgttggc
agtggttctgctgacccaaaccagcagagggatagcagtggtagttctgtggagtcgtta
cctgtccaggcagttgatcaacggcagcagtcgggcctgtctgaaccccaggcagagtcc
tctgcagacaggcaatctccagggacacctgcagcagccaggactccgagcgagagtgaa
gagagaccagaaggcctaccagaccaagtgaagaaatccacactgaacccgaatgccaag
gagttcaaccccaacaaatctgtcctccctgtgtcgaagcagacaagcaccccaactccc
cctcgaccccagactctgcccagcccctcgatcacagtcctgcccccccaaaaccaggga
ggcatctacaacaccccctacatctccaacgtctatcagtttcacatgggacctgctgtc
cagggccaccagatgtaccagtacacagtgtctgcggtgagccaggggaaataccaacga
gccaaaggctctgtgggtcctcagcgctcggatcagcaccacacagcctctgccccaccc
atgatgcaggcagccacagcagcagggccccctctggtggcggcttctccctacccctcc
tcctatatccagtacccccagcaataccctggacagcaggcagtgatgcaggccatccag
cactaccagtctcagccgatgtaccccatgctccagggaggcaacccccgcatgatgacg
tcaggagggcacccccaaacccttgtttcctctagcaccccacagtacccctctgcagac
cagggacccccacaggccatgtacgccaccgtcccccagccctaccctcaccacagcact
cccctgcacccccaccagccccagccagccaccacccccactgggaaccagcaaggaagc
cagcacccggcacccagcccagtgcagcaccagcctggtctgggttcagggcagccccct
cagcagggcctgtatcatacgggggccctgacccccacacccccctccatcacccctgga
ccaaactcccagtccccccagagcggctacagccagcagcaggtctacgccattcacaca
cagctgcagcacggctaccctggcttggggcaactagcgcaggctcatgttcagggtgct
ctctctcagggtcaccctcaccctcaccccaccggctcccacgggcacccccaggtcatg
ctgatccatgctcccccccagcaagggcatggggccccccccaatcaccccgggcagggg
gggcaacagagtggcacgcactacacctacatgcaccaggttccagtgcagcctgtcccc
acacagcagctgtccttccatcctcctgggaactga

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