Polyodon spathula (Mississippi paddlefish): 121307496
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Entry
121307496 CDS
T07273
Name
(RefSeq) potassium channel subfamily T member 1-like
KO
K04946
potassium channel subfamily T member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121307496
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121307496
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
121307496
NCBI-ProteinID:
XP_041095611
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Position
56:149967..222784
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AA seq
1188 aa
AA seq
DB search
MGSVGSEAGQRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLSCLLYIVRV
LLDDPTEGIGCWGCPKQNYTAHANVTEIRWAPILWVDRRLAVWAIQVIVALISFLEAMLL
AYLSYKGNIWEQIFRISFILEMINTAPFIITIFWPPLRNIFIPVFLNCWLAKCALESMIN
DLHRAIQRTQSAMFNQVLILICTLLCLVFTGTCGIQHLERAGNNLSLFKSLYFCIVTFST
VGYGDVTPQIWPSQLLVVIMICVALVVLPLQFEDLVYLWMERQKSGGNYSRHRAQTEKHV
VLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYLQG
SALKDQDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKP
ENKFHVKFADHVVCEEEFKYAMLALNCICPATSTLITLLVHTSRGQTPLDPLNPRQGACH
SLFREGQQSPEQWQRMYGRCSGNEVYHISLGDSKFFGEYEGKSFTYASFHAHKKYGVCLI
GVKREDNKSILLNPGPRHIMAASDTCYYINITKEENSAFIFKQEEKHKKKGMAPGGLHSG
PSRLPVHSIIASMGTVAMDLQNTECCPDSSSSKLALPNENGGNSRRPSIAPVLEIADSTS
ILPCDLLSDQSEDETAQSDDEGLPALEYVKGYPPNSPYIGSSPTLCHLLPQKALFCCLRL
DKGCEHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELNPIVLLLDNP
PDNHFLEAICCFPMVYFMAGTIDNLDNLLQCGIIYADNLVVVDKESTMSAEEDYMADAKT
IVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKKEREKGSNLAFMFR
LPFAAGRVFSISMLDTLLYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKITEDDLWIRT
YGRLFQKLCSSSAEIAIGMYRTESHMFATSESQDIGPQSQISINVEECEDTRDVKEPWNQ
RGSHRNSTSSDQSEHPLLRKKSMQWARRLSRKGNKQTSKTERISQQRLNLYRRSERQELS
ELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQGNSSLGEQRGIESTLNKDGMPA
PNKQAESFVVSQAGLWADSVKNNSPHLPKCNSPTKPSILRYFSITVYF
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagtcggcagcgaagctggccaaagggtgcaagttgagttttacgtcaatgaa
aataccttcaaggagaggctgaagcttttcttcattaaaaaccaaagatcaagtttaaga
atccgactcttcaacttctctctcaagctgctgtcctgcctcttgtacattgtacgggtt
ttactggacgatccaacagagggcattggatgctgggggtgccctaaacagaattacacc
gctcacgcaaacgtaacagaaatcagatgggctcccattctttgggtggacagaagacta
gcagtatgggctattcaggttatcgtggccttaataagtttcttggaggcgatgcttctt
gcatatctgagctacaagggaaacatctgggagcagatcttccgaatatccttcattctg
gagatgattaacacagcccccttcataatcactatattctggcctccactgagaaacata
tttattccagtatttttaaattgctggctggctaaatgtgctctggagagtatgataaat
gacttgcatcgagccatccagaggactcagtcagcaatgttcaaccaagttctcattctt
atctgcactcttctgtgcctagtgtttactgggacctgtggaattcagcacctggagaga
gctggaaacaacctctccctcttcaagtccctgtatttctgcatcgtcacattctccact
gttgggtacggggacgtgacacctcagatctggccgtctcagcttcttgtagttatcatg
atctgtgtggctcttgtggtgctgcctcttcagtttgaggacttggtgtacctgtggatg
gaacggcagaaatctggcgggaattatagccgccaccgcgctcagacagagaagcatgtg
gtgctgtgtgtcagctccctgaagatagacctcctcatggactttctcaatgaattctat
gcacatcccagacttcaggattattatgtggtgattctgtgcccgacggagatggatatt
caggtccgacgagtcctacagattcctctgtggtcacagcgggtcatctacctgcagggg
tcagctctgaaggaccaagatctcatgagggccaaaatggatgatgctgaagcctgtttc
attctgagcagtcggaatgaggtggataggacagcagcagaccatcagacaatcctgaga
gcatgggccgtgaaggactttgcaccaaactgcccgctctatgtccagattctgaagcca
gaaaataaattccatgttaaatttgcagatcatgtagtttgtgaagaagagtttaagtac
gccatgttggctctgaactgtatttgtcctgccacatccaccctcatcactctgttagtt
cacacttcccgaggacaaacccccttggatcctttaaacccgagacaaggagcatgccac
tctttattcagggaaggccagcagtctcctgaacagtggcagcggatgtatggccggtgc
tccgggaacgaggtctatcacatcagcctgggagacagcaagttctttggagagtacgag
gggaagagtttcacctacgcttccttccacgcacataaaaagtacggtgtgtgtttgatt
ggggtcaagagagaagacaataagagcatcttgttgaacccgggtcccagacacatcatg
gccgcctcggatacctgttactacatcaacatcaccaaggaggagaactccgctttcatc
ttcaaacaggaggagaagcacaagaagaagggaatggcacccggggggctgcacagtgga
ccttccagactccctgtccacagcatcatcgccagcatgggtactgttgctatggacctg
cagaacacagagtgctgccccgacagcagcagcagtaaactagccctgcccaatgagaac
ggaggaaacagcagaaggcctagcatcgccccagttctggagatagcagactccacctcc
attctaccatgtgacctgttgagcgaccaatccgaagatgaaacagcccagtcagatgac
gaaggactgcctgctctggagtatgtgaaagggtaccctcccaattcaccttatatcggg
agctctccaaccttgtgtcacctactgcctcagaaagcactgttctgctgtctgagactg
gacaagggctgtgagcacaacagttttgaagatgctaaggcgtatggctttaagaataag
ctgattattgtttcggcagaaactgctgggaatgggttgtataatttcatagttcctctg
cgagcctactatagacccagaaaagaactgaaccccatcgtactgcttctcgacaaccca
cctgataaccacttcttggaggcaatctgctgttttcctatggtctacttcatggctgga
accattgacaacctggataaccttctccagtgtggcatcatctacgctgacaatctggtc
gtagttgataaggagagcaccatgagtgctgaggaggactacatggcagatgctaaaact
atcgtcaatgtccaaactatgttcaggctattccccagtctgagcattatcacagaactc
acccacccctccaatatgaggttcatgcagttcagagccaaggactgctattccctcgcg
ctctccaaactggaaaagaaggagcgtgaaaaaggctcaaacctggccttcatgttcaga
ctcccattcgcagccggcagagtgttcagcatcagcatgctggatactttgctgtatcag
tcatttgtgaaggattacatgatacctatagcaagattattactgggccttgacaccacc
cctgggtcaggatacctgtgtgctatgaagatcacagaagatgatttgtggattagaacg
tatggaaggttattccaaaagctgtgctcatccagtgctgaaattgccattggcatgtac
aggacagaatcccatatgtttgcaacatctgagtcacaagacattggtccacagtcccag
atctccatcaatgttgaggagtgtgaggacacaagggacgtgaaagaaccatggaaccaa
agaggcagccacaggaactccacctccagtgaccaatcggagcacccgttactgaggaag
aagagcatgcagtgggcacggcgactgagcaggaaagggaacaagcaaacgagtaaaacg
gagcgaatcagccagcagagactgaatctgtaccgccgctcagagagacaggagctttct
gagctggtgaaaaaccgaatgaagcacctgggtttgcctaccacaggttacgaggatgta
gcaaatttaactgccagtgatgtgatgaatcgggtaaacctaggatatttgcaaggtaat
tcctcacttggggaacagagaggtattgaaagcacactcaataaggacggaatgccagct
ccaaacaaacaagcggagagtttcgtagtctcacaggctggattgtgggctgactctgtg
aaaaacaattcgcctcatctcccaaaatgtaacagccccacaaaacctagtatcttaaga
tacttctctattaccgtttacttttag
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