Polyodon spathula (Mississippi paddlefish): 121307532
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Entry
121307532 CDS
T07273
Name
(RefSeq) synaptotagmin-like protein 4 isoform X1
KO
K17598
synaptotagmin-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121307532
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121307532
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121307532
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
121307532
Small GTPases and associated proteins
Rab associated proteins
121307532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
121307532
NCBI-ProteinID:
XP_041095656
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All DBs
Position
57:complement(1691189..1701619)
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AA seq
710 aa
AA seq
DB search
MSQDSEVIDVEFLTEQEQLLILQVLQRDEELRKVEEKRIWKLKADLLDIRRKGAKRGSKK
YSSLTCVRCQQKLGRLGSNTSQCHSCNHQVCLNCRVVYPNGAWKCSVCAKEAFQEVTCYS
GALFLYIYRVERELKKATGDWFYDQRINRFISAPGCELVRASIRKKPPASKRGTVAEVLM
LNTQLTEIKAPIAKPRARTEKENGTQGQAQAPEKQRSDTESVKKASLSGFKTESRHATPV
LERKDADGPTTKTSTAGATVSTLTVPVPSTEGPISKDEPESRVGSRSGGSADDSDTLFKK
NPRKTLSSTAFSDKPSRPKSVLDLRQNAPATEDGSMGDRSKSVPGLNAEQEEEDEDIDDL
VQFHRKSEVRHSLRSRGSSSTMGSMMSIYSEAGDYSNVEVTGEIVFSLRYDQIAQVLSIF
IKECHNLAYGDEARKRSHPYVKSYLLPDKSRQGKKKTAVKRSNTNSVYNETLKYNITQAQ
LAMRTLQLSVWHQDRFGHNAFLGEVELPLDSWNFEATAEECLPLHSKASSQYAAYSDYKG
ELVISLRYVPASKPVSDKPRIMKKEEGGELQVWVKEAKNLTAMKAGGTSDTFVKGYLLPV
KTKVTKRKTPVIKKTLNPHYNHTFVYKGMSPEDLKDVCLELTVWDREALSSNDFLGGVRL
GMGTGTHKGEKVDWMDSTGEEVGLWEKMMQYHGSWAEGSLLLYSTMGNIK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggactcggaggtcattgatgtggagttcctgacggagcaggagcaactgctg
atcctgcaagttctgcagcgggatgaagagcttcgcaaggttgaggagaagcgaatctgg
aagctgaaggccgacttgcttgatatccggaggaagggagccaagcgcggcagtaagaag
tacagcagcctcacctgtgtccgctgccagcagaaactgggcaggctgggcagcaacacc
agccagtgccacagctgcaatcaccaggtgtgcctcaactgcagagtcgtctacccaaac
ggcgcctggaaatgcagcgtctgcgccaaagaagcttttcaagaggtaacttgctactca
ggggcccttttcctgtacatatacagagttgaaagagagttgaagaaggccacaggagat
tggttttatgaccagcggatcaatcgcttcatcagtgctcctggatgtgagcttgtgcga
gcttcgattaggaagaaacctccagccagtaagcgggggacagtggctgaggtgctgatg
cttaacacccagctgactgagatcaaggctcccatcgccaaacccagagcgaggacagag
aaggaaaacggcacccagggccaggcccaggctccagagaagcagcgcagcgacactgag
tctgtgaagaaggccagcctgagtggcttcaagactgagtcccgccatgccacccctgtc
ctggagcggaaggatgctgatgggcccacaaccaagaccagcactgctggggccacagtg
tccaccctaactgtccctgtgccatccacagagggcccgatctccaaagatgaaccggaa
tcacgtgttgggagccggagtggagggtctgctgacgactctgacaccttgttcaagaag
aatcccaggaaaacattaagctccactgctttttcagataaacccagtaggcccaagtct
gtgctggatttgcgtcagaatgcaccagcaactgaagatggttctatgggagacaggagc
aagtcggtgccagggctcaatgcagagcaggaggaagaggatgaagatatagatgatctt
gtgcaattccacaggaagtcagaggttcgtcacagtcttcggagcagagggtcttcgagc
acaatgggcagcatgatgagtatctacagtgaggctggggattacagcaatgtggaagtt
accggggaaattgtattttcactgcgctacgatcaaattgcccaggtcctctctatcttc
atcaaggagtgccacaaccttgcgtatggggacgaagccaggaagcgctcccacccgtat
gtcaagtcatacctgctccctgacaaatcacggcagggcaagaagaaaacagcggtcaag
cgctccaatactaactcagtctacaatgaaaccctgaagtacaatatcactcaggcccag
ctggcaatgcggaccctgcagctgtctgtgtggcaccaggaccgcttcggacacaacgcc
ttcctgggagaggtggagctgcctctggactcctggaacttcgaggccaccgcagaggag
tgcctgcccctccactcaaaggcttcttcacagtatgctgcctattctgactataaagga
gagctggtgatttccctcagatacgttcctgccagcaaacctgtctcggacaagcctcga
ataatgaagaaggaggaaggaggagagctgcaagtttgggtcaaagaggccaagaatcta
accgccatgaaagcaggaggcacttcagatacgtttgtaaaagggtatttgttgccagtg
aagaccaaagtgactaagaggaagaccccggtgataaagaagactctgaaccctcactac
aatcataccttcgtctacaaaggcatgagtcccgaggatctgaaggatgtctgcctggag
ctgaccgtgtgggaccgggaggcgctgtccagcaatgacttcctgggaggggtcagactg
ggcatgggtaccggcacacacaaaggagagaaggtcgactggatggactccacaggcgag
gaggtcggtctgtgggagaagatgatgcagtatcacggctcttgggcagagggctcttta
ctgctctactccacaatgggcaacatcaaatga
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