Polyodon spathula (Mississippi paddlefish): 121307561
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Entry
121307561 CDS
T07273
Name
(RefSeq) anoctamin-5-like isoform X1
KO
K19480
anoctamin-5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121307561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121307561
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121307561
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Gene cluster
GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
Ctr
TMIE
Smim3
Motif
Other DBs
NCBI-GeneID:
121307561
NCBI-ProteinID:
XP_041095693
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All DBs
Position
57:291096..310721
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AA seq
915 aa
AA seq
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MLFCSIEDEIAVLTRFTMKWLTGEDNNGLPSSATVSHLPGIPEIWRKRALFLKSRCRIEK
QPQSKDSIFFRDGVRRIDFVLSYVDDPTKDGEKKAERRKEFEINLQKAGLELETEGKSES
DDGKTYFLKIHSPWDVLATYAEVLKIKVPFKESDIPSDNESPLSWLFKPFKLPDEVMYPE
PDYFTSPFEKNKSGFFLIEDKDAIFPPSTRNRIVYYILSRCPYATEEGKRKLGIKRLLNN
GSYTAAFPLHDCRYWKKARDQNCENERFTLYRSWARFMSFYKEQPLNLIRKYYGEKIGIY
FAWLGFYTEMLFYAAVIGLICFCYGASTYSDNVWSQEICSVDIGGEIVMCPLCDRKCGYW
KLNTTCESSFQSHLFDNVGTLFFAIFMGIWVTMFLEFWKRRQARLEYEWDLVDFEEEQQQ
LQLRPEYETKCTRRRMNPVTQEEENVLNRGRLDICGKMVICWATVILWIALIIACIIAVI
AYRLAVYAAFASIMKENQTQDLQLVGSLITPQLATSVTASCLNFVVIMILNILYERVAIW
ITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFVGYPGNYTYMFGVLRNE
ECDPGGCLIELTTQLLIVMAGKQIWGNIQEALVPWLKNWWGSRKARNHPEGLYTRWEQDH
DLQCLGQLGLFYEYLEMVIQFGFVTLFVASFPLAPLLALCNNILEVRVDAWKFTTQFRRP
VAAKAHSIGAWQEILNAVAIMSVVTNAFIVAFTSDMIPRLVYYYVYRPGTINSMEGYISN
SLSIFNISQFKPHNMPDDGESPSWFNSSIITTCRYRDYRYPPGHEKEYQQNMQFWHVLAA
KMAFIIIMEHVVFMVKFFVAWMIPDVPNDVKARVKREKYLTQEYLHNYEIEMLKKQLGEK
PPSSMDHHEVLSEVI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctgttccattgaagacgagatagcagtgctgacgaggttcacgatgaaatgg
ctgacaggggaagacaataatggtctaccaagttccgccacagtctctcacctgcccggc
attcccgagatctggaggaagagggcgctgttcctgaaatcccgctgcaggatagagaaa
cagcctcagagcaaagattcaattttcttcagggatggagtccggaggattgactttgtc
ctctcgtatgttgacgaccccacgaaggacggagagaagaaagcagaaaggagaaaggaa
tttgaaattaatttgcagaaggccggtctggaactggagacagagggtaaaagtgagtcg
gacgacgggaagacctacttcctgaagatccactctccgtgggatgtgctggccacatac
gcggaggtcctgaagatcaaagtgcccttcaaagagagtgacatccccagcgacaacgag
tcgcccctgagctggctgttcaagcctttcaaactcccagacgaggtgatgtaccccgag
ccagactacttcacctcgcccttcgagaagaacaagtcgggcttcttcctgatcgaggac
aaggacgccatcttccccccctccacccgcaacaggattgtgtactacattctgtcacgg
tgcccctacgcgacagaggagggaaagagaaagctgggaatcaagcggcttctgaacaac
ggatcctacacggcagccttcccgcttcacgattgccggtactggaagaaagcaagggac
cagaactgtgagaatgagaggttcaccctgtacaggtcatgggccaggttcatgtccttt
tacaaggagcagcccctgaatctcatcaggaagtactatggagagaagattgggatctac
tttgcctggctgggtttctacacagaaatgcttttctatgcggcggtcattggtttaatc
tgtttctgctatggtgcttccacctacagtgataatgtctggagccaggaaatctgcagt
gtggatattggaggcgagattgttatgtgccctctgtgtgaccggaagtgtggttattgg
aaactgaacacaacctgcgaatcctcctttcaatcgcatctgtttgacaacgttggcacg
ttattctttgccattttcatgggtatatgggtgaccatgttcctggagttctggaagcgc
cggcaggcccggctggagtacgagtgggacctggtggacttcgaggaggagcagcagcag
ctccagctccggcccgagtacgagaccaagtgcaccaggcgcaggatgaacccggtcacc
caggaggaggagaatgttctgaatagaggcagacttgatatctgtgggaaaatggtgatc
tgttgggccacagtgatcctttggatcgccctcatcatcgcctgcatcatcgccgtcatt
gcgtaccgcctcgctgtttacgccgccttcgccagcatcatgaaggagaaccagacccag
gacctgcagctggtgggctccctgatcaccccgcagctcgccacttctgtcacagcctcc
tgcctcaactttgtggtgatcatgatcctgaatatcctgtacgagcgagtggcaatctgg
atcactgatttggaaatccccaagactcacctggagtatgagaaccggctgaccatgaag
atgttcctcttccagttcgtcaactactactcctcctgcttctacgtggccttcttcaag
ggcaagttcgtgggctaccccggcaactacacctacatgtttggagtgctgagaaacgag
gagtgtgaccctggcggctgtctcattgaacttacaacacagcttctcattgtcatggcc
ggcaagcaaatctggggcaacattcaggaagcccttgtgccgtggttgaagaactggtgg
ggaagccgcaaggcgcgtaatcacccggagggcctgtacacccgctgggagcaggaccac
gacctgcagtgcctcggacagctggggctgttctacgagtacctggagatggtgatccag
tttgggtttgtcaccctgttcgtggcctccttccccctggctcctctccttgctctctgc
aacaacatcttggaggtgcgcgtggacgcctggaagttcaccacccagttccgcaggccc
gtggcggccaaggcccacagcatcggagcgtggcaggagatcctcaacgcagtggctatc
atgtctgtggtcaccaacgccttcatcgtggcgttcacctcggacatgatcccccggctg
gtgtattactatgtctaccgccctggcacgattaactccatggaggggtacatcagtaac
agcctgtctatcttcaacatctcccagtttaagccccacaacatgccggacgacggagag
agccccagctggttcaacagctccatcatcactacctgcagatacagagattaccgctat
cctccagggcacgagaaggagtaccagcaaaacatgcagttctggcacgtcctggcggct
aaaatggccttcattatcatcatggagcacgtggtgttcatggtgaagttctttgtggcc
tggatgatcccggacgtcccgaacgatgtgaaggcacgggtgaagagggagaagtacctc
acccaggagtacctgcacaactatgagatcgagatgctgaagaagcagctgggagagaag
cccccttcctccatggaccatcacgaggtgctgtccgaggtcatatag
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