Polyodon spathula (Mississippi paddlefish): 121307661
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Entry
121307661 CDS
T07273
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C-like
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
PS-DH
PP-binding
adh_short
CurL-like_PKS_C
PKS_DH_N
adh_short_C2
Thiolase_N
ACP_SdgA_C
ADH_N
RhiE-like_linker
Motif
Other DBs
NCBI-GeneID:
121307661
NCBI-ProteinID:
XP_041095829
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All DBs
Position
3:7664483..7674944
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AA seq
2116 aa
AA seq
DB search
MGDTDENIAVVGIGCNFPGGEGVDNFWKVLLEGKNCAVEIPSERFNSTLWYDPDDSKPGK
SRTAKAALIDGFNEFDHRLFGIPEAEADRMDPQQKLLLQCTYRALEHAGMPLEKASGTTT
GVFIGIMNRDYEMILNNCASTADHYNGTGTAISIAANRISYCFNFTGPSFAIDSACSSSL
VALHYACQAIKQGDCDMAVCGGVSCIIEPRVFVALSKAKMISPEGTSKPFSSKADGYGRG
EGCGIVLLKPLAKAQKELDHVWGIIASSNVNQDGRAVTPITKPSMAQQEELLLRIYSTRV
DPSHVQYVEAHGTGTAVGDPTEAGSISNAIAKARPPGSPALLIGSVKGNIGHTESAAGVA
GLIKVLLMMHHETIAPSLHYSEDNSSIDAESLRLKVPTTAEKWEKSGPLGRAAGVNNFGF
GGTNAHVVVRQYKQSHVLNSEIQRPLEIVVLSAVSGKSIQMMMEDTAQQISTNDAIKLHD
LAYTSACRRSHTRHKYRKAFLAPSLSKLNQQLKSAANMTVTQAESGAQFVFVFCGNGVTY
NGMCRQLLKGEHIFREKVKEIQSVFHNYTSICLLEKLENGSDDDYLKPDIVQPLLFTIQV
AIASLLKHWGIKPDAIVGHSVGEVAAAHCSGLLSLHDAVKVIYFRSTLQSKVTRGKMLVV
GNIPVSEVEQFLPAYSGKACIAAFNSPQSCTLSGESEAIDGLHQKLSTSFSSKNLFLHVL
DVPVAYHSHMMEPILNPIQDKIGLLQKRDMEAELFSTVTGHLATEGDFTTGQYWAKNIGE
PVAFEQAVKSAAAGKKHVVFVEIGPRRALQRNIMEIVGNGAPVFPSVQPDKDYETLLTVV
SKAFEFGLKVDWEQFYKAHETLPTPCPRYQFDVIKKEVYFELVRQGNDSVASSIHPVLCS
AGIDSKEINCNISTEATPYIYEHKNNGVVIVPGAFYVELGLASVMASVRPKLQLSSMQLS
ISFLSPCIVSQNLTELKIMLEQHKSETTFKVKSPVATHASGNIQHGCENLVEEKNLSLEF
IYKRCALVVKSEEVYDQLSSVGFQYGSVFRQLGDVHYGEELQEAVTRINVPEEVIVQLHE
YCIHPVVLDYFLQMTATVAANAFKSRPGFPSGIGSLIVSQPLQKEMFMYLRTSKVTPDFI
EVCGGFTDKEGSILVELKHVRITFLGSSSLVRKEFFFHNEWKEDTEIVNSTIAPKALVFA
DQLGVAKYLRNYMHPESTYIYYKDLEQLSTLDITELFTGFTWPDSYDDYDEVLFLWGFQN
LSELSTEKVLLNMVNCCEVYRQVVNDLKEKKSKCPIRTITYRTTEKAVDHINPGFALCGM
TRACAAEISDLSFQLIDIHSVSKEDIAALGQVITSYKTSKYPEVMISKGQIYTSFIIRTP
VKSSGSSQKRMLNSSSESFVLQTVDPYRMADLHANTTSDHKKHLKKQTVEVQLNKICVHS
SDYFPVSLSDLNFGQTLYWSKHAADEHKLLALDFSGTVTAVGSDVKKLKVGDPIASCYPV
VASSKVVLPEAVCYDSRKLPFLMETPCVSYFVLAWEILYHALPKLKQRRRLCVLSSEPES
SLLKVLALIAKKSGWDAIFGTEFSGLLQNVNKCEALVLLPPFDTSLVVKVCHVSNAKHIV
IVCDSHLFLSVSQSLLRNENEDVHIHILQIANVFQKANLMKYKKGIYKWMKSMHFENKSL
TLTRNIFQKQIMGSSEHIDTEETESYFLSKCISLVVLDDASKNRVSDIPVHENQKQLFQQ
SSVYIVTGGLSGLGFETVKFIAQRGGGCIVILSRSAPSPERQQEITNMQNQFGVTIISVQ
CDVAIRKDVEKAIGLIGQSFPACPIKGVFHSAVVLHDGLIHTLNRSHFDKVLRPKVAGAL
NLHYATKHCQLDYFICYSSITSFIGNSAQTNYAAANSFLDVFCHYRRNCGLSGQSINWGA
LNLGLLLNKVSFQRFLEAKGMVIMELPEIHEGLESCLLQDNPQQTVCKFSFKNLNGHVLS
QNTSLRMRFYTVVTEELKNTDVTDPQLLQSTSLIRPGDYVRMLLCEVSNADPDELTNDTS
LSAFGIDSMLAMTLQNRIFQERHVNVPLVKLLDPNTTVCALVSLLQENCHESPQYDEQDL
SMSITAYENNTQVTKF
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacagatgaaaacattgctgttgtgggaattggatgcaattttccaggaggt
gaaggagttgacaacttttggaaggtccttctggagggtaaaaactgtgcagtggagata
ccttcagaaagattcaacagcacattgtggtacgatccagatgacagcaagccagggaaa
tcacgtacagcgaaagcagctctcattgatgggttcaatgaatttgatcacaggctgttt
ggcattcctgaagcagaggcagatcgaatggatccgcagcaaaagcttctcctgcagtgc
acctatcgagctctggagcatgctgggatgccactggaaaaggccagtggaaccacaaca
ggggttttcattggtattatgaacagagactatgaaatgattttgaataattgtgccagt
acagctgaccattacaatggcactgggacagcgataagcatagctgccaataggatttcc
tactgttttaactttaccggaccttcgtttgcaattgacagcgcgtgctcttcatccctg
gttgctcttcattatgcctgccaagcaattaagcaaggcgactgtgatatggcagtctgt
ggtggagtcagttgcatcatagagccaagagtttttgtcgctctcagcaaagcaaaaatg
atatctcctgaaggaaccagcaaacctttctccagcaaggctgatggctacggaagagga
gaaggctgtggcattgtcttgcttaagccattagcaaaggcacagaaggagttagaccac
gtctggggaatcatagctagcagtaatgtaaatcaggatggcagagcagtcactccaatc
accaaaccatcaatggcccaacaggaagaacttctgctcaggatttactcaacacgtgtt
gacccatcacatgtacagtatgtagaggctcatgggactggaacagctgtaggggatccg
acagaagcaggcagcatctctaatgccattgcaaaagcacggcctccaggctcaccggct
cttctgataggctctgtaaaaggtaacattggtcacactgaatctgcagcaggggtcgca
gggttgatcaaggtcctattgatgatgcaccatgaaacaattgctccgtctttacactat
tctgaagacaattccagcatcgatgctgaatctctcaggcttaaggttccaaccacagca
gaaaagtgggaaaaatctggaccacttggaagagctgcaggtgttaataactttggtttt
gggggaaccaatgcacatgttgttgtcaggcaatacaaacaatcacacgttctgaattca
gaaatacaaaggccacttgaaatagttgtgctgtctgcagtctcaggaaaatcaatccaa
atgatgatggaagacacagcccaacagatcagcacaaatgatgcaataaagctacatgat
ctggcttatacctctgcatgcaggagaagtcacacaagacacaaatacagaaaagctttt
ctagctccatctctcagtaaattaaaccaacaacttaaatctgcagcaaacatgacagtt
actcaagcagagtcaggtgcacaattcgtttttgtgttctgtggaaatggggtcacctac
aatggcatgtgccgacagctattaaagggggaacacatattcagagaaaaggtgaaagaa
atacaaagtgtttttcataactacacttccatctgtctcttagagaagctagaaaatggt
tctgatgatgattatttaaagccagacattgtccagccactgctttttaccattcaggtg
gcaattgccagccttttaaagcactggggtataaagccagatgctatagttgggcattct
gtgggcgaggttgctgctgcacattgctctggattactgtcccttcatgatgctgttaag
gtcatttatttccgcagtactttgcagtccaaggttactagagggaaaatgcttgttgtt
ggaaacatacccgtgtcagaagtggaacagtttcttccagcttattcagggaaagcttgc
attgctgccttcaacagcccccagtcatgcaccttgtcaggcgagtctgaagctatagat
ggtcttcatcagaaactgtcaacatcattcagctccaagaacctattcctccatgttcta
gatgtcccagttgcataccacagtcacatgatggagcccattttgaaccctatacaggac
aagataggtctcttacaaaaaagagacatggaagcagagttgttttctacagtaacaggg
catttagctactgaaggagattttaccacaggccagtactgggccaagaacattggagaa
ccagttgcattcgaacaggcagtgaaatcagcagcggctgggaagaaacatgtcgttttt
gtagagataggtccgagaagggccctgcaaaggaatattatggaaattgtagggaatggg
gctccagtgtttccatctgtgcagcctgacaaagactatgagactctgcttacagttgtg
tcaaaggcatttgagtttgggttgaaagtagattgggaacaattctacaaagcacatgag
actctacctacaccctgcccaaggtatcagtttgatgttatcaaaaaagaggtgtatttt
gagttggtacgacagggcaatgacagtgtagcaagttctattcatccagtgctgtgcagt
gcaggtattgacagcaaggagatcaactgcaacatatcaacagaggcaacaccatacatt
tatgaacataaaaacaatggcgttgttatagtccctggtgcattctatgttgaattaggc
ttggcatctgtcatggctagtgtgagaccaaaactacagctcagctccatgcaactcagc
attagtttccttagcccttgtattgtgagtcagaatttaactgagctaaagataatgctt
gagcaacacaaaagtgagaccacatttaaagtaaagtctccagtggcaacccatgcatcg
ggtaacatccagcatggctgtgaaaacttagttgaagaaaagaacttatcactggaattc
atctacaaaagatgtgcattagtagtgaagtctgaagaagtttatgaccagctgtctagt
gtagggttccagtatgggtctgtgttcagacagcttggtgatgtgcattatggggaagag
cttcaggaagctgttacaaggattaatgtcccagaagaagttatcgtacagttgcacgag
tactgcattcaccctgtagttttagattatttcttacaaatgacagctactgtagcagca
aatgctttcaaatccagacctgggtttccttctggtattggcagtttgatagtatctcag
cccctgcagaaagaaatgttcatgtacttgagaacaagcaaagtgactcctgacttcatt
gaggtatgtggggggttcacagataaagaaggctctattttagttgaacttaaacatgta
aggattacatttttaggaagcagttctttggttagaaaggaattcttctttcataatgag
tggaaagaagatactgaaatagtaaactctaccattgcacccaaagcattagtgtttgca
gaccagcttggtgtggccaaatatctcagaaactacatgcacccagagtctacatatatt
tattacaaagatttagaacagttgtcaacacttgatattacagaattgtttactgggttt
acttggccagactcttacgacgactatgatgaggttttattcttgtggggatttcaaaac
ctcagtgagctaagtacagagaaagtgttgctgaatatggtaaactgctgtgaagtttat
cgacaggttgtcaatgacttgaaggaaaagaaatccaaatgtcccatcagaaccatcaca
tacagaacaacagagaaggcagtggatcacattaatccaggatttgcactgtgtggaatg
accagggcatgtgctgcagaaatttcagatctctcctttcaattgattgatattcattct
gtaagcaaggaggacatcgcagcactgggccaagtgattacctcatacaaaacgtcaaaa
tacccagaggtcatgataagcaagggtcagatttacacatctttcattatacgcacacct
gttaaaagttcaggcagtagccaaaaaaggatgttgaattccagttctgaaagttttgtt
ctccaaacagtagatccatatagaatggcagatctacatgcaaacactaccagtgatcac
aaaaaacaccttaagaagcaaactgtagaggttcagctcaataagatatgtgtccattca
tctgattactttcctgtcagcctgtccgatttgaattttggtcaaaccctgtactggagt
aaacatgcagctgatgaacacaaacttttagctctagacttcagtggtacagttacagca
gtggggagtgatgtgaaaaagttaaaggtaggagatcccatagcttcatgctacccagtt
gttgcatcttctaaggtcgtacttcctgaggcagtctgttatgacagtagaaagcttccc
ttcctaatggaaactccctgtgtttcctactttgtactggcatgggaaatactatatcac
gcattacccaaattaaaacaacggagaaggctatgtgtcttatcctctgaacctgagtca
agcttgctgaaagttttagcactcatagcaaaaaagtcaggatgggatgctatatttgga
acagaattcagtggtctactgcagaatgtaaataagtgtgaggctttagttcttttgcct
ccatttgacacatctttagtggtaaaagtctgccatgtttccaatgccaagcacatcgtt
atagtgtgtgatagccatctgttcctctctgtttctcaaagtctgctgagaaatgaaaat
gaagatgttcacattcatatccttcaaatagccaatgtgtttcagaaagccaatctcatg
aaatacaaaaaaggcatctataaatggatgaagtcgatgcattttgaaaataagtccttg
actctaacaagaaacatcttccaaaaacaaataatgggcagcagtgagcacatcgatacc
gaggagactgaatcttatttcttatcaaagtgcatctccctggttgtgctagatgatgca
tcaaagaacagggtttctgatattcctgttcatgagaatcaaaaacagcttttccaacaa
agctctgtttatatagtgactggaggactttcaggtcttggatttgagacagtgaagttc
attgctcagcggggaggcggctgcattgttattctttccagaagtgctccttcccctgag
agacaacaagagattacaaacatgcagaatcagtttggggttactattataagtgtccag
tgtgatgttgccatccgcaaggatgttgagaaggcaatcggtcttattggtcaatctttt
cctgcttgtccaattaaaggagtgtttcacagtgctgtcgtcttacacgatggcttaatc
cacactttaaacagatcccactttgacaaagttctgagacctaaggttgcaggggccttg
aatcttcactacgcaacaaagcattgccaactggactatttcatttgttactcctccatc
acttcctttattggaaattcagcccaaacaaactacgctgcagcaaactcatttctggat
gtcttttgccattaccggaggaactgtggactttcaggacagtccatcaactggggagct
ttgaacctgggactcctgctaaacaaggttagtttccaacgctttcttgaggctaaggga
atggtaatcatggagctacctgagattcatgaagggcttgaaagctgcttgttgcaggac
aatccacagcaaactgtgtgcaaattcagcttcaaaaatttaaatggccatgtcctttcc
caaaacacctctctcagaatgcgtttctatactgtggttacagaagaactcaagaatact
gatgtaactgacccacagttattacagagcacatctctcatcagacctggtgattatgtt
aggatgctgctttgtgaagtaagcaacgctgatccagatgagttgacaaatgacacatct
ctctctgcttttgggattgattcaatgctggcaatgacccttcaaaatcgtatctttcag
gaaagacatgtgaatgtaccacttgttaaattacttgatccgaacacaacagtgtgtgct
ttagtgtcacttctccaggaaaactgccatgaaagtcctcagtatgatgaacaggacttg
tcaatgagtatcacagcgtacgaaaataacacccaagtgacaaagttttag
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