Polyodon spathula (Mississippi paddlefish): 121307689
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Entry
121307689 CDS
T07273
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121307689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121307689
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121307689
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121307689
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IQ
Motif
Other DBs
NCBI-GeneID:
121307689
NCBI-ProteinID:
XP_041095862
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Position
58:complement(684266..690793)
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AA seq
542 aa
AA seq
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MFGVAQSSKSQFLDKARQAREERKGQRERERAATQIQALIRRFLCHCRLQKQIRREVDEF
FEGCDAGSSKRNALSIFKIARKLLFIFIMKEDKLRFEKLCRCILGSMEVENEPKVWYVSL
ALSKDLTLLWIKQVKDILWISCEFLKKLKPDILQDNKMVTLYLSMLVTFTDTSTWKILRV
KGEALRPALNRICENIMGQLNQKGFYTILQILLTNGLARSRPCLSKASLTAIFTLALRPV
IAAHFSDNLLRSLLIHIMSVPAIVSHLHTLTPECIATIQAHDLLRKFILFLSREEQCSDI
CVCLEGSHTLCLLGNLIHLGYLTEKVLEEEANHFVRDLTDMLSYCQRYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLVTKQLQYLWGVTVIRTLFSDVLSKKLESQEPAQSGAQSST
QQTNLPVKNLFKRAFQKSASVRNILKPVGGRRVDSVEVRKVCSICVLYQTALTTLTQIRL
QILTGLTYLDDLLPKLWAFICELGPQGGLKLFMECLNNDTKESKRLLAMLMLFCDCSRHL
IT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgtggctcagtcctccaagtcccagttcctggacaaggccaggcaggctcgc
gaggagaggaaggggcagcgggagcgggagagagctgccacacagatacaggctctcatc
cgacgcttcctctgccactgccgcctgcagaagcaaatcaggagggaggttgatgaattc
tttgaaggctgtgatgctggatcttctaaaagaaacgcactttcaatttttaaaattgca
agaaaattattatttatattcataatgaaagaagataagttgaggtttgaaaaattgtgc
cgctgcatccttgggagcatggaggtggagaatgaacccaaggtgtggtatgtgtcccta
gcactttcgaaagacctcactctcctgtggataaaacaggtaaaggacatcctctggata
tcctgcgagttcctgaaaaagctaaagccggacatcctgcaagacaacaagatggtgacc
ctgtacctcagcatgctggtgacctttacagacacgagcacgtggaagattctccgggta
aagggagaggcccttcggccagccctgaaccggatttgtgagaacattatgggccaactc
aatcaaaagggattttatactatactgcagattttgttaacaaatggactggcgagatcc
aggccctgtctttcaaaagcctctttaacagccatctttactttggcactacggcctgtt
attgctgctcacttctctgataacctgttgagatccttgctgatccacatcatgtctgtc
ccagccatcgtctcacacctccacactcttacaccggagtgcatagccactatccaggct
cacgacctcctgcggaagttcatcctgtttctgagcagggaggagcagtgcagtgatatc
tgtgtgtgcctggaagggagccacacactgtgccttctggggaacctcatccacctgggc
tacctgactgagaaggtgctggaggaggaagccaaccactttgtgagggacctgaccgac
atgctgtcctactgccagagatacgtctcgcagaagaagtccaacctcactcactggcac
cctgttctgggctggttctcccagactgtcgactacggtttgaatgagtcgatgcctttg
gtcaccaagcagctgcagtacctgtggggggtcactgtgatccgaacgctcttcagcgat
gtgctgagcaagaagctggagagccaggagcctgctcagtcaggcgctcagtcatcgaca
cagcagaccaacctacccgtgaagaatctcttcaagcgcgcgttccagaagtcagcctcg
gtgcgtaacatcctgaagccagtgggggggaggcgtgtggactcggtggaggtgcgcaag
gtgtgcagtatctgtgtgctgtaccagactgccctcaccacgctcacacagatcagactg
cagatccttacagggctgacttacctggacgacctgctccccaagctctgggcctttatc
tgtgagctgggaccccagggagggctcaagctgttcatggagtgcctgaacaatgacacc
aaggagtccaagaggctcctggccatgctcatgctgttctgtgactgctccaggcacctc
atcacgtga
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